Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.41□□□□□ -0.26
Usp44Q8C2S0 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Snord17-201ENSMUST00000104526 238 ntBASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Mup-ps29-201ENSMUST00000122281 202 ntBASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Gm43138-201ENSMUST00000199123 708 ntBASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Gm44315-201ENSMUST00000203041 219 ntBASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Gm45398-201ENSMUST00000210561 165 ntBASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.4□□□□□ -0.26
Usp44Q8C2S0 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Gm44153-201ENSMUST00000204162 1580 ntBASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Gm33366-201ENSMUST00000195583 3827 ntBASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC13.4□□□□□ -0.26
Usp44Q8C2S0 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Usp44Q8C2S0 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Gm25076-201ENSMUST00000104098 132 ntBASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Gm43916-201ENSMUST00000205062 967 ntBASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Usp44Q8C2S0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Gm14942-201ENSMUST00000119642 336 ntBASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC13.38□□□□□ -0.27
Usp44Q8C2S0 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Gm24992-201ENSMUST00000157412 130 ntBASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Usp44Q8C2S0 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Gm7183-201ENSMUST00000213870 1005 ntBASIC13.38□□□□□ -0.27
Usp44Q8C2S0 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.38□□□□□ -0.27
Usp44Q8C2S0 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.38□□□□□ -0.27
Usp44Q8C2S0 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms