Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cps1Q8C196 AC151836.1-201ENSMUST00000228730 1637 ntBASIC15.18■□□□□ 0.02
Cps1Q8C196 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cps1Q8C196 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC15.18■□□□□ 0.02
Cps1Q8C196 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Cps1Q8C196 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cps1Q8C196 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cps1Q8C196 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cps1Q8C196 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cps1Q8C196 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cps1Q8C196 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cps1Q8C196 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 Gm15031-201ENSMUST00000121341 210 ntBASIC15.17■□□□□ 0.02
Cps1Q8C196 Gm16305-201ENSMUST00000140747 556 ntBASIC15.17■□□□□ 0.02
Cps1Q8C196 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cps1Q8C196 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC15.17■□□□□ 0.02
Cps1Q8C196 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cps1Q8C196 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC15.17■□□□□ 0.02
Cps1Q8C196 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC15.17■□□□□ 0.02
Cps1Q8C196 Gm45310-201ENSMUST00000210436 275 ntBASIC15.17■□□□□ 0.02
Cps1Q8C196 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 AC154639.1-201ENSMUST00000224393 2849 ntBASIC15.17■□□□□ 0.02
Cps1Q8C196 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Cps1Q8C196 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC15.17■□□□□ 0.02
Cps1Q8C196 Gm12028-201ENSMUST00000118065 436 ntBASIC15.17■□□□□ 0.02
Cps1Q8C196 Gm13700-201ENSMUST00000118624 1128 ntBASIC15.17■□□□□ 0.02
Cps1Q8C196 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC15.17■□□□□ 0.02
Cps1Q8C196 Gm28671-201ENSMUST00000187036 692 ntBASIC15.17■□□□□ 0.02
Cps1Q8C196 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC15.17■□□□□ 0.02
Cps1Q8C196 Gm7904-201ENSMUST00000217049 465 ntBASIC15.17■□□□□ 0.02
Cps1Q8C196 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cps1Q8C196 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 Gm7405-201ENSMUST00000121476 1337 ntBASIC15.17■□□□□ 0.02
Cps1Q8C196 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cps1Q8C196 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cps1Q8C196 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cps1Q8C196 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cps1Q8C196 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cps1Q8C196 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cps1Q8C196 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cps1Q8C196 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cps1Q8C196 AC122273.1-201ENSMUST00000213634 2327 ntBASIC15.16■□□□□ 0.02
Cps1Q8C196 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cps1Q8C196 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cps1Q8C196 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC15.16■□□□□ 0.02
Cps1Q8C196 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cps1Q8C196 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
Cps1Q8C196 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cps1Q8C196 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cps1Q8C196 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cps1Q8C196 Gm14034-201ENSMUST00000120147 551 ntBASIC15.16■□□□□ 0.02
Cps1Q8C196 Gm18042-201ENSMUST00000219887 790 ntBASIC15.16■□□□□ 0.02
Cps1Q8C196 AC102569.1-201ENSMUST00000221563 685 ntBASIC15.16■□□□□ 0.02
Cps1Q8C196 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC15.16■□□□□ 0.02
Cps1Q8C196 AC109214.1-201ENSMUST00000219520 1372 ntBASIC15.16■□□□□ 0.02
Cps1Q8C196 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cps1Q8C196 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cps1Q8C196 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cps1Q8C196 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Gm37058-201ENSMUST00000193393 1644 ntBASIC15.15■□□□□ 0.02
Cps1Q8C196 AC137950.2-202ENSMUST00000227150 1635 ntBASIC15.15■□□□□ 0.02
Cps1Q8C196 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Gm5472-201ENSMUST00000178604 1678 ntBASIC15.15■□□□□ 0.02
Cps1Q8C196 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Gm42858-201ENSMUST00000202512 1704 ntBASIC15.15■□□□□ 0.02
Cps1Q8C196 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Gm5766-201ENSMUST00000160520 1977 ntBASIC15.15■□□□□ 0.02
Cps1Q8C196 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC15.15■□□□□ 0.02
Cps1Q8C196 Gm15815-201ENSMUST00000120569 255 ntBASIC15.15■□□□□ 0.02
Cps1Q8C196 Gm26174-201ENSMUST00000158415 219 ntBASIC15.15■□□□□ 0.02
Cps1Q8C196 Gm24346-201ENSMUST00000158712 194 ntBASIC15.15■□□□□ 0.02
Cps1Q8C196 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cps1Q8C196 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms