Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdhr3Q8BL00 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Cdhr3Q8BL00 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Gm11509-201ENSMUST00000117358 325 ntBASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Cts7-204ENSMUST00000225321 1257 ntBASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Gm7399-201ENSMUST00000032395 858 ntBASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.01□□□□□ -0.81
Cdhr3Q8BL00 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Gm44913-201ENSMUST00000208060 2990 ntBASIC10□□□□□ -0.81
Cdhr3Q8BL00 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Gm43908-201ENSMUST00000205074 1472 ntBASIC10□□□□□ -0.81
Cdhr3Q8BL00 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10□□□□□ -0.81
Cdhr3Q8BL00 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Gm5616-201ENSMUST00000165252 384 ntBASIC10□□□□□ -0.81
Cdhr3Q8BL00 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Gm8741-201ENSMUST00000174736 384 ntBASIC10□□□□□ -0.81
Cdhr3Q8BL00 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Gm38228-201ENSMUST00000193169 1293 ntBASIC10□□□□□ -0.81
Cdhr3Q8BL00 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Gm45865-201ENSMUST00000211815 945 ntBASIC10□□□□□ -0.81
Cdhr3Q8BL00 AC113082.1-201ENSMUST00000217324 327 ntBASIC10□□□□□ -0.81
Cdhr3Q8BL00 Gm5186-201ENSMUST00000218781 920 ntBASIC10□□□□□ -0.81
Cdhr3Q8BL00 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Cdhr3Q8BL00 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdhr3Q8BL00 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms