Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Gm45161-201ENSMUST00000207316 2263 ntBASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc40Q8BI79 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Rims2-204ENSMUST00000226410 3685 ntBASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc40Q8BI79 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Mir7677-201ENSMUST00000184226 67 ntBASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc40Q8BI79 Gm18038-201ENSMUST00000197900 485 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms