Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Gm7741-201ENSMUST00000181445 989 ntBASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Gm38314-201ENSMUST00000195709 625 ntBASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Gm42518-201ENSMUST00000196277 938 ntBASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nudcd1Q6PIP5 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Gm12247-201ENSMUST00000117585 670 ntBASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Gm44315-201ENSMUST00000203041 219 ntBASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Gm2875-201ENSMUST00000211333 360 ntBASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Gm18065-201ENSMUST00000221395 526 ntBASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Nudcd1Q6PIP5 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Gm23153-201ENSMUST00000175323 313 ntBASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.6□□□□□ -0.55
Nudcd1Q6PIP5 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms