Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col12a1Q60847 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col12a1Q60847 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC11.02□□□□□ -0.65
Col12a1Q60847 Gm26943-201ENSMUST00000182295 957 ntBASIC11.02□□□□□ -0.65
Col12a1Q60847 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC11.02□□□□□ -0.65
Col12a1Q60847 Gm5424-201ENSMUST00000053865 1240 ntBASIC11.02□□□□□ -0.65
Col12a1Q60847 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col12a1Q60847 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col12a1Q60847 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Col12a1Q60847 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col12a1Q60847 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Col12a1Q60847 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col12a1Q60847 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col12a1Q60847 Gm23908-201ENSMUST00000104599 132 ntBASIC11.02□□□□□ -0.65
Col12a1Q60847 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC11.02□□□□□ -0.65
Col12a1Q60847 Tspy-ps-203ENSMUST00000186546 989 ntBASIC11.02□□□□□ -0.65
Col12a1Q60847 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.02□□□□□ -0.65
Col12a1Q60847 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col12a1Q60847 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.02□□□□□ -0.65
Col12a1Q60847 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC11.02□□□□□ -0.65
Col12a1Q60847 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col12a1Q60847 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col12a1Q60847 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col12a1Q60847 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col12a1Q60847 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.01□□□□□ -0.65
Col12a1Q60847 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.01□□□□□ -0.65
Col12a1Q60847 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.01□□□□□ -0.65
Col12a1Q60847 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Col12a1Q60847 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC11.01□□□□□ -0.65
Col12a1Q60847 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Gm8525-201ENSMUST00000189674 861 ntBASIC11.01□□□□□ -0.65
Col12a1Q60847 Gm43103-201ENSMUST00000199021 802 ntBASIC11.01□□□□□ -0.65
Col12a1Q60847 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Col12a1Q60847 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Col12a1Q60847 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Gm4925-202ENSMUST00000168843 1561 ntBASIC11.01□□□□□ -0.65
Col12a1Q60847 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Col12a1Q60847 Gm8163-201ENSMUST00000122020 1060 ntBASIC11.01□□□□□ -0.65
Col12a1Q60847 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC11.01□□□□□ -0.65
Col12a1Q60847 Gm13898-201ENSMUST00000141865 610 ntBASIC11.01□□□□□ -0.65
Col12a1Q60847 Gm16560-201ENSMUST00000159115 404 ntBASIC11.01□□□□□ -0.65
Col12a1Q60847 Gm15664-201ENSMUST00000160167 184 ntBASIC11.01□□□□□ -0.65
Col12a1Q60847 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Col12a1Q60847 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Col12a1Q60847 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC11.01□□□□□ -0.65
Col12a1Q60847 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC11.01□□□□□ -0.65
Col12a1Q60847 Gm25514-201ENSMUST00000083860 135 ntBASIC11.01□□□□□ -0.65
Col12a1Q60847 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Col12a1Q60847 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col12a1Q60847 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.01□□□□□ -0.65
Col12a1Q60847 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Col12a1Q60847 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Col12a1Q60847 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Col12a1Q60847 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC11□□□□□ -0.65
Col12a1Q60847 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC11□□□□□ -0.65
Col12a1Q60847 Gm13758-201ENSMUST00000118699 743 ntBASIC11□□□□□ -0.65
Col12a1Q60847 Gm12240-201ENSMUST00000120178 229 ntBASIC11□□□□□ -0.65
Col12a1Q60847 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Gm18862-201ENSMUST00000204643 933 ntBASIC11□□□□□ -0.65
Col12a1Q60847 AC155300.1-201ENSMUST00000219134 480 ntBASIC11□□□□□ -0.65
Col12a1Q60847 AC134860.2-201ENSMUST00000225277 1036 ntBASIC11□□□□□ -0.65
Col12a1Q60847 AC107711.3-201ENSMUST00000228939 1035 ntBASIC11□□□□□ -0.65
Col12a1Q60847 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Col12a1Q60847 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Gm7790-201ENSMUST00000118716 1310 ntBASIC11□□□□□ -0.65
Col12a1Q60847 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col12a1Q60847 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC11□□□□□ -0.65
Col12a1Q60847 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC11□□□□□ -0.65
Col12a1Q60847 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Col12a1Q60847 Gm2328-201ENSMUST00000193525 535 ntBASIC11□□□□□ -0.65
Col12a1Q60847 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms