Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Treml4Q3LRV9 Gm7536-201ENSMUST00000077389 444 ntBASIC10.9□□□□□ -0.66
Treml4Q3LRV9 Gm5453-201ENSMUST00000080866 447 ntBASIC10.9□□□□□ -0.66
Treml4Q3LRV9 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Treml4Q3LRV9 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Treml4Q3LRV9 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Treml4Q3LRV9 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Treml4Q3LRV9 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.9□□□□□ -0.66
Treml4Q3LRV9 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Treml4Q3LRV9 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Treml4Q3LRV9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Treml4Q3LRV9 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Treml4Q3LRV9 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Treml4Q3LRV9 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
Treml4Q3LRV9 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Treml4Q3LRV9 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Treml4Q3LRV9 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Treml4Q3LRV9 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Treml4Q3LRV9 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Treml4Q3LRV9 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Treml4Q3LRV9 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Gm7150-201ENSMUST00000122032 981 ntBASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Gm29410-201ENSMUST00000188383 694 ntBASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 AC159376.1-201ENSMUST00000218504 630 ntBASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Gm5805-201ENSMUST00000072779 456 ntBASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Treml4Q3LRV9 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Gm14892-201ENSMUST00000117636 267 ntBASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Gm15744-201ENSMUST00000161734 213 ntBASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Treml4Q3LRV9 Gm9135-201ENSMUST00000182963 990 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms