Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ebf1Q07802 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Ebf1Q07802 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Gm26047-201ENSMUST00000157308 113 ntBASIC11.67□□□□□ -0.54
Ebf1Q07802 Gm10807-201ENSMUST00000177134 795 ntBASIC11.67□□□□□ -0.54
Ebf1Q07802 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Gm26047-202ENSMUST00000198840 115 ntBASIC11.67□□□□□ -0.54
Ebf1Q07802 Gm44315-201ENSMUST00000203041 219 ntBASIC11.67□□□□□ -0.54
Ebf1Q07802 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.67□□□□□ -0.54
Ebf1Q07802 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.67□□□□□ -0.54
Ebf1Q07802 Gm7940-201ENSMUST00000218195 769 ntBASIC11.67□□□□□ -0.54
Ebf1Q07802 Gm9139-201ENSMUST00000218817 700 ntBASIC11.67□□□□□ -0.54
Ebf1Q07802 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.67□□□□□ -0.54
Ebf1Q07802 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.67□□□□□ -0.54
Ebf1Q07802 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Ebf1Q07802 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Ebf1Q07802 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.67□□□□□ -0.54
Ebf1Q07802 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.67□□□□□ -0.54
Ebf1Q07802 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.67□□□□□ -0.54
Ebf1Q07802 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Ebf1Q07802 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.67□□□□□ -0.54
Ebf1Q07802 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf1Q07802 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.66□□□□□ -0.54
Ebf1Q07802 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.66□□□□□ -0.54
Ebf1Q07802 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ebf1Q07802 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ebf1Q07802 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.66□□□□□ -0.54
Ebf1Q07802 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ebf1Q07802 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.66□□□□□ -0.54
Ebf1Q07802 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Gm9089-201ENSMUST00000122027 526 ntBASIC11.66□□□□□ -0.54
Ebf1Q07802 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.66□□□□□ -0.54
Ebf1Q07802 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.66□□□□□ -0.54
Ebf1Q07802 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.66□□□□□ -0.54
Ebf1Q07802 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.66□□□□□ -0.54
Ebf1Q07802 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.66□□□□□ -0.54
Ebf1Q07802 Gm8574-201ENSMUST00000203207 924 ntBASIC11.66□□□□□ -0.54
Ebf1Q07802 Gm35713-201ENSMUST00000210516 199 ntBASIC11.66□□□□□ -0.54
Ebf1Q07802 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Gm9111-201ENSMUST00000219394 709 ntBASIC11.66□□□□□ -0.54
Ebf1Q07802 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Ebf1Q07802 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Mir483-201ENSMUST00000093631 73 ntBASIC11.66□□□□□ -0.54
Ebf1Q07802 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.66□□□□□ -0.54
Ebf1Q07802 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Ebf1Q07802 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.66□□□□□ -0.54
Ebf1Q07802 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Ebf1Q07802 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf1Q07802 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Ebf1Q07802 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms