Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm6114-201ENSMUST00000182472 968 ntBASIC8.91□□□□□ -0.98
Cdx4Q07424 Gm8343-201ENSMUST00000182705 994 ntBASIC8.91□□□□□ -0.98
Cdx4Q07424 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cdx4Q07424 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC8.91□□□□□ -0.98
Cdx4Q07424 Gm270-201ENSMUST00000223010 976 ntBASIC8.91□□□□□ -0.98
Cdx4Q07424 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC8.91□□□□□ -0.98
Cdx4Q07424 Gm807-202ENSMUST00000224929 408 ntBASIC8.91□□□□□ -0.98
Cdx4Q07424 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Cdx4Q07424 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cdx4Q07424 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Cdx4Q07424 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cdx4Q07424 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cdx4Q07424 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cdx4Q07424 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cdx4Q07424 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cdx4Q07424 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cdx4Q07424 Gm28719-201ENSMUST00000187779 1757 ntBASIC8.91□□□□□ -0.98
Cdx4Q07424 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cdx4Q07424 AC124577.2-201ENSMUST00000217413 2420 ntBASIC8.91□□□□□ -0.98
Cdx4Q07424 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cdx4Q07424 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cdx4Q07424 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cdx4Q07424 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cdx4Q07424 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Cdx4Q07424 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Gm37131-201ENSMUST00000192502 1561 ntBASIC8.9□□□□□ -0.98
Cdx4Q07424 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Gm19692-201ENSMUST00000203856 2084 ntBASIC8.9□□□□□ -0.98
Cdx4Q07424 AC154404.1-201ENSMUST00000223601 2077 ntBASIC8.9□□□□□ -0.98
Cdx4Q07424 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Gm37368-201ENSMUST00000193173 3212 ntBASIC8.9□□□□□ -0.98
Cdx4Q07424 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 AC171277.1-201ENSMUST00000216902 1441 ntBASIC8.9□□□□□ -0.98
Cdx4Q07424 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Cdx4Q07424 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC8.9□□□□□ -0.98
Cdx4Q07424 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Cdx4Q07424 Gm26286-201ENSMUST00000104166 134 ntBASIC8.9□□□□□ -0.98
Cdx4Q07424 Gm23596-201ENSMUST00000104304 132 ntBASIC8.9□□□□□ -0.98
Cdx4Q07424 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Cdx4Q07424 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC8.9□□□□□ -0.98
Cdx4Q07424 Gm15432-201ENSMUST00000121106 195 ntBASIC8.9□□□□□ -0.98
Cdx4Q07424 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Cdx4Q07424 Gm26047-201ENSMUST00000157308 113 ntBASIC8.9□□□□□ -0.98
Cdx4Q07424 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC8.9□□□□□ -0.98
Cdx4Q07424 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC8.9□□□□□ -0.98
Cdx4Q07424 Gm20426-201ENSMUST00000173657 440 ntBASIC8.9□□□□□ -0.98
Cdx4Q07424 Gm26047-202ENSMUST00000198840 115 ntBASIC8.9□□□□□ -0.98
Cdx4Q07424 Gm42629-201ENSMUST00000199063 1102 ntBASIC8.9□□□□□ -0.98
Cdx4Q07424 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC8.9□□□□□ -0.98
Cdx4Q07424 Gm7207-201ENSMUST00000211575 1067 ntBASIC8.9□□□□□ -0.98
Cdx4Q07424 Gm1821-202ENSMUST00000227415 750 ntBASIC8.9□□□□□ -0.98
Cdx4Q07424 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Gm5705-201ENSMUST00000066241 711 ntBASIC8.9□□□□□ -0.98
Cdx4Q07424 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cdx4Q07424 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Cdx4Q07424 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Cdx4Q07424 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Cdx4Q07424 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC8.9□□□□□ -0.99
Cdx4Q07424 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Cdx4Q07424 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Cdx4Q07424 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx4Q07424 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx4Q07424 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC8.89□□□□□ -0.99
Cdx4Q07424 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx4Q07424 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx4Q07424 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx4Q07424 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx4Q07424 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx4Q07424 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx4Q07424 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC8.89□□□□□ -0.99
Cdx4Q07424 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx4Q07424 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx4Q07424 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Cdx4Q07424 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx4Q07424 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx4Q07424 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx4Q07424 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx4Q07424 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
Cdx4Q07424 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cdx4Q07424 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC8.89□□□□□ -0.99
Cdx4Q07424 Gm11941-201ENSMUST00000119904 610 ntBASIC8.89□□□□□ -0.99
Cdx4Q07424 Gm12164-201ENSMUST00000121695 551 ntBASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms