Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Gm15276-201ENSMUST00000145953 498 ntBASIC10.9□□□□□ -0.66
Cxcr5Q04683 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.9□□□□□ -0.66
Cxcr5Q04683 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.9□□□□□ -0.66
Cxcr5Q04683 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcr5Q04683 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.9□□□□□ -0.66
Cxcr5Q04683 AA914427-201ENSMUST00000193194 1166 ntBASIC10.9□□□□□ -0.66
Cxcr5Q04683 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcr5Q04683 Gm45224-201ENSMUST00000208203 414 ntBASIC10.9□□□□□ -0.66
Cxcr5Q04683 Gm45865-201ENSMUST00000211815 945 ntBASIC10.9□□□□□ -0.66
Cxcr5Q04683 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.9□□□□□ -0.66
Cxcr5Q04683 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.9□□□□□ -0.66
Cxcr5Q04683 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcr5Q04683 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.9□□□□□ -0.66
Cxcr5Q04683 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.9□□□□□ -0.66
Cxcr5Q04683 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcr5Q04683 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcr5Q04683 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.9□□□□□ -0.66
Cxcr5Q04683 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.9□□□□□ -0.66
Cxcr5Q04683 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.9□□□□□ -0.66
Cxcr5Q04683 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cxcr5Q04683 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcr5Q04683 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcr5Q04683 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcr5Q04683 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cxcr5Q04683 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cxcr5Q04683 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcr5Q04683 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcr5Q04683 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cxcr5Q04683 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Cxcr5Q04683 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cxcr5Q04683 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cxcr5Q04683 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cxcr5Q04683 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cxcr5Q04683 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cxcr5Q04683 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cxcr5Q04683 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cxcr5Q04683 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cxcr5Q04683 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cxcr5Q04683 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Gm27627-201ENSMUST00000183644 150 ntBASIC10.89□□□□□ -0.67
Cxcr5Q04683 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.89□□□□□ -0.67
Cxcr5Q04683 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.89□□□□□ -0.67
Cxcr5Q04683 AY036118-201ENSMUST00000200021 923 ntBASIC10.89□□□□□ -0.67
Cxcr5Q04683 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Gm13097-201ENSMUST00000210722 397 ntBASIC10.89□□□□□ -0.67
Cxcr5Q04683 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.89□□□□□ -0.67
Cxcr5Q04683 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.89□□□□□ -0.67
Cxcr5Q04683 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cxcr5Q04683 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.88□□□□□ -0.67
Cxcr5Q04683 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cxcr5Q04683 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cxcr5Q04683 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cxcr5Q04683 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cxcr5Q04683 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cxcr5Q04683 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.88□□□□□ -0.67
Cxcr5Q04683 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cxcr5Q04683 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.88□□□□□ -0.67
Cxcr5Q04683 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Cxcr5Q04683 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cxcr5Q04683 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cxcr5Q04683 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cxcr5Q04683 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
Cxcr5Q04683 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms