Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Gm14644-201ENSMUST00000116671 647 ntBASIC11.11□□□□□ -0.63
Msx2Q03358 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Gm17150-201ENSMUST00000165577 381 ntBASIC11.11□□□□□ -0.63
Msx2Q03358 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Msx2Q03358 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Msx2Q03358 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.11□□□□□ -0.63
Msx2Q03358 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.11□□□□□ -0.63
Msx2Q03358 Gm8712-201ENSMUST00000221090 701 ntBASIC11.11□□□□□ -0.63
Msx2Q03358 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Msx2Q03358 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Msx2Q03358 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.11□□□□□ -0.63
Msx2Q03358 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Msx2Q03358 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Msx2Q03358 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Msx2Q03358 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Msx2Q03358 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Msx2Q03358 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.1□□□□□ -0.63
Msx2Q03358 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Msx2Q03358 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Msx2Q03358 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Msx2Q03358 Gm23931-201ENSMUST00000103842 109 ntBASIC11.1□□□□□ -0.63
Msx2Q03358 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Msx2Q03358 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Msx2Q03358 Gm13297-201ENSMUST00000120205 934 ntBASIC11.1□□□□□ -0.63
Msx2Q03358 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Msx2Q03358 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Msx2Q03358 Mospd4-201ENSMUST00000180618 576 ntBASIC11.1□□□□□ -0.63
Msx2Q03358 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Msx2Q03358 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Msx2Q03358 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Msx2Q03358 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Msx2Q03358 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.1□□□□□ -0.63
Msx2Q03358 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Msx2Q03358 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Msx2Q03358 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Msx2Q03358 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Msx2Q03358 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Msx2Q03358 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.1□□□□□ -0.63
Msx2Q03358 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Msx2Q03358 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Msx2Q03358 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Msx2Q03358 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Msx2Q03358 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Msx2Q03358 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Msx2Q03358 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Msx2Q03358 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Msx2Q03358 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Msx2Q03358 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Msx2Q03358 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Msx2Q03358 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Msx2Q03358 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Msx2Q03358 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Msx2Q03358 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Msx2Q03358 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Msx2Q03358 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Msx2Q03358 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Msx2Q03358 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Msx2Q03358 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC11.09□□□□□ -0.63
Msx2Q03358 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Msx2Q03358 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.09□□□□□ -0.63
Msx2Q03358 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Msx2Q03358 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Msx2Q03358 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.09□□□□□ -0.63
Msx2Q03358 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Msx2Q03358 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Msx2Q03358 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Msx2Q03358 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Msx2Q03358 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.09□□□□□ -0.63
Msx2Q03358 Gm15004-201ENSMUST00000119192 630 ntBASIC11.09□□□□□ -0.63
Msx2Q03358 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.09□□□□□ -0.63
Msx2Q03358 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.09□□□□□ -0.63
Msx2Q03358 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.09□□□□□ -0.63
Msx2Q03358 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Msx2Q03358 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.09□□□□□ -0.63
Msx2Q03358 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.09□□□□□ -0.63
Msx2Q03358 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.09□□□□□ -0.63
Msx2Q03358 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.09□□□□□ -0.63
Msx2Q03358 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.09□□□□□ -0.63
Msx2Q03358 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Msx2Q03358 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Msx2Q03358 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms