Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 AC138716.2-201ENSMUST00000226670 1016 ntBASIC14.37□□□□□ -0.11
Nkx2-3P97334 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-3P97334 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nkx2-3P97334 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Nkx2-3P97334 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-3P97334 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-3P97334 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-3P97334 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-3P97334 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-3P97334 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-3P97334 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-3P97334 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-3P97334 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx2-3P97334 AC155245.1-201ENSMUST00000222266 1804 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 Gm14005-209ENSMUST00000224993 1832 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Gm14005-210ENSMUST00000225087 1413 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC14.36□□□□□ -0.11
Nkx2-3P97334 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Snord55-201ENSMUST00000174939 79 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 Gm23647-201ENSMUST00000175042 109 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 Rn5s-201ENSMUST00000177555 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s108-201ENSMUST00000177575 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s121-201ENSMUST00000177589 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s146-201ENSMUST00000177889 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 Gm22109-201ENSMUST00000177995 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 Gm22291-201ENSMUST00000178027 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s141-201ENSMUST00000178066 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 Gm23284-201ENSMUST00000178069 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s100-201ENSMUST00000178106 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s111-201ENSMUST00000178203 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s105-201ENSMUST00000178499 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s149-201ENSMUST00000178520 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s103-201ENSMUST00000178755 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s123-201ENSMUST00000178804 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s142-201ENSMUST00000178820 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s144-201ENSMUST00000178859 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s139-201ENSMUST00000178975 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s134-201ENSMUST00000178983 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s136-201ENSMUST00000179080 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 Gm25018-201ENSMUST00000179081 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s104-201ENSMUST00000179107 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s113-201ENSMUST00000179143 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s133-201ENSMUST00000179275 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s117-201ENSMUST00000179431 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 Gm25212-201ENSMUST00000179432 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s138-201ENSMUST00000179476 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s122-201ENSMUST00000179500 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s143-201ENSMUST00000179542 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s107-201ENSMUST00000179704 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 Gm26391-201ENSMUST00000179843 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s110-201ENSMUST00000179995 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s128-201ENSMUST00000180096 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 n-R5s124-201ENSMUST00000180334 119 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Gm19927-201ENSMUST00000185792 781 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 Gm44552-201ENSMUST00000205458 1247 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC14.36□□□□□ -0.11
Nkx2-3P97334 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Gm24089-201ENSMUST00000093696 109 ntBASIC14.36□□□□□ -0.11
Nkx2-3P97334 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nkx2-3P97334 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.35□□□□□ -0.11
Nkx2-3P97334 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-3P97334 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms