Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC6.52□□□□□ -1.37
Rps28P62858 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC6.52□□□□□ -1.37
Rps28P62858 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC6.52□□□□□ -1.37
Rps28P62858 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Gm2467-201ENSMUST00000182266 1010 ntBASIC6.52□□□□□ -1.37
Rps28P62858 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Rps28P62858 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Rps28P62858 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC6.52□□□□□ -1.37
Rps28P62858 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Gm4968-201ENSMUST00000071458 858 ntBASIC6.52□□□□□ -1.37
Rps28P62858 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Rps28P62858 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Rps28P62858 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Rps28P62858 Filip1-201ENSMUST00000093811 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Cd200r4-201ENSMUST00000114626 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Rps28P62858 Gm26896-201ENSMUST00000180482 2526 ntTSL 5 BASIC6.52□□□□□ -1.37
Rps28P62858 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC6.52□□□□□ -1.37
Rps28P62858 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC6.52□□□□□ -1.37
Rps28P62858 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC6.52□□□□□ -1.37
Rps28P62858 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC6.52□□□□□ -1.37
Rps28P62858 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC6.52□□□□□ -1.37
Rps28P62858 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC6.52□□□□□ -1.37
Rps28P62858 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC6.52□□□□□ -1.37
Rps28P62858 Col28a1-201ENSMUST00000115537 4230 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Dpy19l2-201ENSMUST00000133010 3442 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 1700123J17Rik-201ENSMUST00000206035 1805 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Kprp-201ENSMUST00000072363 2729 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Rps28P62858 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Thsd1-202ENSMUST00000160585 3276 ntTSL 5 BASIC6.52□□□□□ -1.37
Rps28P62858 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC6.52□□□□□ -1.37
Rps28P62858 Dgki-201ENSMUST00000042075 3028 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Rps28P62858 Cpeb1os1-201ENSMUST00000207156 2112 ntBASIC6.52□□□□□ -1.37
Rps28P62858 Xrcc6-201ENSMUST00000069530 2114 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Rps28P62858 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Rps28P62858 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Rps28P62858 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Polr1b-202ENSMUST00000103205 3998 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Rps28P62858 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Rps28P62858 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Rps28P62858 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Rps28P62858 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Rps28P62858 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Rps28P62858 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Rps28P62858 Dennd2d-204ENSMUST00000183271 2050 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Zfp53-201ENSMUST00000076664 2058 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Rps28P62858 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Zkscan1-204ENSMUST00000110963 4670 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Nup133-201ENSMUST00000044795 5808 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Rps28P62858 AC121286.2-201ENSMUST00000218069 2470 ntBASIC6.51□□□□□ -1.37
Rps28P62858 Camk2a-201ENSMUST00000025519 3244 ntTSL 5 BASIC6.51□□□□□ -1.37
Rps28P62858 Sf3b2-201ENSMUST00000025774 3231 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 AC140393.1-202ENSMUST00000228347 1818 ntBASIC6.51□□□□□ -1.37
Rps28P62858 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Samd15-202ENSMUST00000182869 2031 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Rps28P62858 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC6.51□□□□□ -1.37
Rps28P62858 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Rps28P62858 AA543401-201ENSMUST00000164248 1269 ntBASIC6.51□□□□□ -1.37
Rps28P62858 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC6.51□□□□□ -1.37
Rps28P62858 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Rps28P62858 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC6.51□□□□□ -1.37
Rps28P62858 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms