Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Rps3a2-201ENSMUST00000074245 792 ntBASIC13.54□□□□□ -0.24
Lrch1P62046 Rps3a3-201ENSMUST00000074680 795 ntBASIC13.54□□□□□ -0.24
Lrch1P62046 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lrch1P62046 Gm6478-201ENSMUST00000099450 742 ntBASIC13.54□□□□□ -0.24
Lrch1P62046 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lrch1P62046 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lrch1P62046 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lrch1P62046 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.54□□□□□ -0.24
Lrch1P62046 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lrch1P62046 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC13.54□□□□□ -0.24
Lrch1P62046 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lrch1P62046 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lrch1P62046 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lrch1P62046 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lrch1P62046 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Lrch1P62046 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lrch1P62046 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Lrch1P62046 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lrch1P62046 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lrch1P62046 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lrch1P62046 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Lrch1P62046 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Lrch1P62046 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Lrch1P62046 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Lrch1P62046 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.53□□□□□ -0.24
Lrch1P62046 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.53□□□□□ -0.24
Lrch1P62046 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Lrch1P62046 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.53□□□□□ -0.24
Lrch1P62046 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Lrch1P62046 Gm14071-201ENSMUST00000117817 509 ntBASIC13.53□□□□□ -0.24
Lrch1P62046 Gm9133-201ENSMUST00000118289 540 ntBASIC13.53□□□□□ -0.24
Lrch1P62046 Gm15982-201ENSMUST00000121681 554 ntBASIC13.53□□□□□ -0.24
Lrch1P62046 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Lrch1P62046 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC13.53□□□□□ -0.24
Lrch1P62046 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC13.53□□□□□ -0.24
Lrch1P62046 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC13.53□□□□□ -0.24
Lrch1P62046 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Lrch1P62046 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Lrch1P62046 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Lrch1P62046 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Lrch1P62046 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Lrch1P62046 Gm19013-201ENSMUST00000183895 1222 ntBASIC13.53□□□□□ -0.24
Lrch1P62046 Gm19014-201ENSMUST00000184828 1189 ntBASIC13.53□□□□□ -0.24
Lrch1P62046 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC13.53□□□□□ -0.24
Lrch1P62046 Gm43244-201ENSMUST00000196994 1285 ntBASIC13.53□□□□□ -0.24
Lrch1P62046 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Lrch1P62046 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Lrch1P62046 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Gm12912-201ENSMUST00000121596 1381 ntBASIC13.53□□□□□ -0.24
Lrch1P62046 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.53□□□□□ -0.24
Lrch1P62046 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lrch1P62046 Gm42499-201ENSMUST00000196193 1412 ntBASIC13.53□□□□□ -0.24
Lrch1P62046 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.53□□□□□ -0.24
Lrch1P62046 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.53□□□□□ -0.24
Lrch1P62046 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.53□□□□□ -0.24
Lrch1P62046 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.53□□□□□ -0.24
Lrch1P62046 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Lrch1P62046 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Lrch1P62046 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lrch1P62046 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lrch1P62046 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lrch1P62046 AC022682.1-201ENSMUST00000224624 2023 ntBASIC13.52□□□□□ -0.24
Lrch1P62046 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Lrch1P62046 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lrch1P62046 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lrch1P62046 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lrch1P62046 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Lrch1P62046 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lrch1P62046 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Lrch1P62046 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lrch1P62046 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Lrch1P62046 Gm12986-201ENSMUST00000119037 967 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms