Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pdx1P52946 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.34□□□□□ -0.59
Pdx1P52946 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.34□□□□□ -0.59
Pdx1P52946 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdx1P52946 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Pdx1P52946 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Pdx1P52946 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.33□□□□□ -0.6
Pdx1P52946 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pdx1P52946 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pdx1P52946 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.33□□□□□ -0.6
Pdx1P52946 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pdx1P52946 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Gm15329-201ENSMUST00000121408 155 ntBASIC11.33□□□□□ -0.6
Pdx1P52946 Gm15549-201ENSMUST00000121595 622 ntBASIC11.33□□□□□ -0.6
Pdx1P52946 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.33□□□□□ -0.6
Pdx1P52946 Gm4726-201ENSMUST00000135604 736 ntBASIC11.33□□□□□ -0.6
Pdx1P52946 Gm6019-201ENSMUST00000148369 736 ntBASIC11.33□□□□□ -0.6
Pdx1P52946 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.33□□□□□ -0.6
Pdx1P52946 Mir8115-201ENSMUST00000184992 119 ntBASIC11.33□□□□□ -0.6
Pdx1P52946 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Gm43138-201ENSMUST00000199123 708 ntBASIC11.33□□□□□ -0.6
Pdx1P52946 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Pdx1P52946 Olfr584-201ENSMUST00000098210 964 ntBASIC11.33□□□□□ -0.6
Pdx1P52946 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.33□□□□□ -0.6
Pdx1P52946 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pdx1P52946 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.33□□□□□ -0.6
Pdx1P52946 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Pdx1P52946 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
Pdx1P52946 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.33□□□□□ -0.6
Pdx1P52946 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pdx1P52946 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdx1P52946 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pdx1P52946 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Pdx1P52946 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pdx1P52946 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdx1P52946 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.32□□□□□ -0.6
Pdx1P52946 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdx1P52946 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdx1P52946 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdx1P52946 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdx1P52946 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pdx1P52946 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.32□□□□□ -0.6
Pdx1P52946 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdx1P52946 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdx1P52946 Gm12419-201ENSMUST00000116649 636 ntBASIC11.32□□□□□ -0.6
Pdx1P52946 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pdx1P52946 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Pdx1P52946 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pdx1P52946 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdx1P52946 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.32□□□□□ -0.6
Pdx1P52946 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pdx1P52946 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.32□□□□□ -0.6
Pdx1P52946 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.32□□□□□ -0.6
Pdx1P52946 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Pdx1P52946 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.32□□□□□ -0.6
Pdx1P52946 Gm8342-201ENSMUST00000209839 757 ntBASIC11.32□□□□□ -0.6
Pdx1P52946 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.32□□□□□ -0.6
Pdx1P52946 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.32□□□□□ -0.6
Pdx1P52946 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdx1P52946 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.32□□□□□ -0.6
Pdx1P52946 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms