Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Shmt1P50431 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Shmt1P50431 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.14□□□□□ -0.47
Shmt1P50431 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.14□□□□□ -0.47
Shmt1P50431 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Shmt1P50431 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt1P50431 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Shmt1P50431 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Shmt1P50431 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Shmt1P50431 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.13□□□□□ -0.47
Shmt1P50431 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Shmt1P50431 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.13□□□□□ -0.47
Shmt1P50431 Gm37826-201ENSMUST00000195329 322 ntBASIC12.13□□□□□ -0.47
Shmt1P50431 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.13□□□□□ -0.47
Shmt1P50431 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.13□□□□□ -0.47
Shmt1P50431 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.13□□□□□ -0.47
Shmt1P50431 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Shmt1P50431 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.13□□□□□ -0.47
Shmt1P50431 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.13□□□□□ -0.47
Shmt1P50431 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt1P50431 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.12□□□□□ -0.47
Shmt1P50431 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Shmt1P50431 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.12□□□□□ -0.47
Shmt1P50431 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Shmt1P50431 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.12□□□□□ -0.47
Shmt1P50431 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Shmt1P50431 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Shmt1P50431 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Shmt1P50431 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.12□□□□□ -0.47
Shmt1P50431 Gm8111-201ENSMUST00000117659 987 ntBASIC12.12□□□□□ -0.47
Shmt1P50431 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.12□□□□□ -0.47
Shmt1P50431 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.12□□□□□ -0.47
Shmt1P50431 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.12□□□□□ -0.47
Shmt1P50431 Gm7600-201ENSMUST00000209657 785 ntBASIC12.12□□□□□ -0.47
Shmt1P50431 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.12□□□□□ -0.47
Shmt1P50431 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Shmt1P50431 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.12□□□□□ -0.47
Shmt1P50431 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Shmt1P50431 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.12□□□□□ -0.47
Shmt1P50431 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.12□□□□□ -0.47
Shmt1P50431 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Shmt1P50431 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.12□□□□□ -0.47
Shmt1P50431 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms