Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.8□□□□□ -0.68
Sox6P40645 Gm43962-201ENSMUST00000203898 190 ntBASIC10.8□□□□□ -0.68
Sox6P40645 Gm17812-201ENSMUST00000204935 318 ntBASIC10.8□□□□□ -0.68
Sox6P40645 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.8□□□□□ -0.68
Sox6P40645 Gm9257-201ENSMUST00000221254 232 ntBASIC10.8□□□□□ -0.68
Sox6P40645 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.8□□□□□ -0.68
Sox6P40645 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Sox6P40645 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.8□□□□□ -0.68
Sox6P40645 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.8□□□□□ -0.68
Sox6P40645 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Sox6P40645 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.8□□□□□ -0.68
Sox6P40645 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox6P40645 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.79□□□□□ -0.68
Sox6P40645 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sox6P40645 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.79□□□□□ -0.68
Sox6P40645 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.79□□□□□ -0.68
Sox6P40645 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.79□□□□□ -0.68
Sox6P40645 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sox6P40645 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sox6P40645 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.79□□□□□ -0.68
Sox6P40645 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sox6P40645 Gm27627-201ENSMUST00000183644 150 ntBASIC10.79□□□□□ -0.68
Sox6P40645 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Gm4857-201ENSMUST00000192718 785 ntBASIC10.79□□□□□ -0.68
Sox6P40645 Gm45224-201ENSMUST00000208203 414 ntBASIC10.79□□□□□ -0.68
Sox6P40645 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.79□□□□□ -0.68
Sox6P40645 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Sox6P40645 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sox6P40645 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sox6P40645 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sox6P40645 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.79□□□□□ -0.68
Sox6P40645 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sox6P40645 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sox6P40645 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.79□□□□□ -0.68
Sox6P40645 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sox6P40645 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.78□□□□□ -0.68
Sox6P40645 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Sox6P40645 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sox6P40645 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.78□□□□□ -0.68
Sox6P40645 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Sox6P40645 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sox6P40645 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sox6P40645 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sox6P40645 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms