Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.47□□□□□ -0.89
Timp3P39876 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Timp3P39876 Gm37580-201ENSMUST00000192408 2800 ntBASIC9.47□□□□□ -0.89
Timp3P39876 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Timp3P39876 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
Timp3P39876 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Btrc-209ENSMUST00000224478 2194 ntBASIC9.47□□□□□ -0.89
Timp3P39876 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Timp3P39876 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC9.47□□□□□ -0.89
Timp3P39876 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Timp3P39876 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Timp3P39876 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Gm44999-201ENSMUST00000207456 1493 ntBASIC9.47□□□□□ -0.89
Timp3P39876 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Timp3P39876 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Timp3P39876 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Timp3P39876 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Timp3P39876 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Timp3P39876 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Timp3P39876 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Timp3P39876 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Timp3P39876 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Timp3P39876 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Timp3P39876 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Timp3P39876 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.46□□□□□ -0.89
Timp3P39876 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Timp3P39876 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Timp3P39876 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Gm13916-201ENSMUST00000117368 628 ntBASIC9.46□□□□□ -0.9
Timp3P39876 Gm12029-201ENSMUST00000120073 832 ntBASIC9.46□□□□□ -0.9
Timp3P39876 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC9.46□□□□□ -0.9
Timp3P39876 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Gm26047-201ENSMUST00000157308 113 ntBASIC9.46□□□□□ -0.9
Timp3P39876 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.9
Timp3P39876 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Timp3P39876 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC9.46□□□□□ -0.9
Timp3P39876 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC9.46□□□□□ -0.9
Timp3P39876 Gm26047-202ENSMUST00000198840 115 ntBASIC9.46□□□□□ -0.9
Timp3P39876 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Timp3P39876 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.46□□□□□ -0.9
Timp3P39876 Gm45398-201ENSMUST00000210561 165 ntBASIC9.46□□□□□ -0.9
Timp3P39876 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.46□□□□□ -0.9
Timp3P39876 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.46□□□□□ -0.9
Timp3P39876 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Timp3P39876 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC9.46□□□□□ -0.9
Timp3P39876 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Timp3P39876 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC9.46□□□□□ -0.9
Timp3P39876 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Timp3P39876 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Timp3P39876 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Timp3P39876 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Timp3P39876 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Timp3P39876 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Timp3P39876 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Timp3P39876 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.45□□□□□ -0.9
Timp3P39876 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Timp3P39876 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Timp3P39876 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms