Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh4P39038 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh4P39038 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdh4P39038 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh4P39038 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Cdh4P39038 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh4P39038 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh4P39038 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh4P39038 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh4P39038 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cdh4P39038 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh4P39038 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Cdh4P39038 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh4P39038 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh4P39038 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Cdh4P39038 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh4P39038 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh4P39038 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh4P39038 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Cdh4P39038 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh4P39038 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh4P39038 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Cdh4P39038 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh4P39038 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh4P39038 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh4P39038 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Cdh4P39038 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh4P39038 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh4P39038 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh4P39038 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Cdh4P39038 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh4P39038 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Cdh4P39038 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.02□□□□□ -0.65
Cdh4P39038 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdh4P39038 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh4P39038 Gm24844-201ENSMUST00000158679 127 ntBASIC11.02□□□□□ -0.65
Cdh4P39038 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.02□□□□□ -0.65
Cdh4P39038 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh4P39038 Gm42997-202ENSMUST00000200321 985 ntBASIC11.02□□□□□ -0.65
Cdh4P39038 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.02□□□□□ -0.65
Cdh4P39038 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Cdh4P39038 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.02□□□□□ -0.65
Cdh4P39038 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh4P39038 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh4P39038 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh4P39038 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.02□□□□□ -0.65
Cdh4P39038 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh4P39038 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh4P39038 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Cdh4P39038 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh4P39038 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.02□□□□□ -0.65
Cdh4P39038 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cdh4P39038 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh4P39038 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.02□□□□□ -0.65
Cdh4P39038 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh4P39038 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh4P39038 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cdh4P39038 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cdh4P39038 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cdh4P39038 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh4P39038 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh4P39038 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh4P39038 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.01□□□□□ -0.65
Cdh4P39038 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cdh4P39038 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.01□□□□□ -0.65
Cdh4P39038 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.01□□□□□ -0.65
Cdh4P39038 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.01□□□□□ -0.65
Cdh4P39038 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Cdh4P39038 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.01□□□□□ -0.65
Cdh4P39038 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.01□□□□□ -0.65
Cdh4P39038 Gm15352-201ENSMUST00000118696 270 ntBASIC11.01□□□□□ -0.65
Cdh4P39038 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.01□□□□□ -0.65
Cdh4P39038 Gm7150-201ENSMUST00000122032 981 ntBASIC11.01□□□□□ -0.65
Cdh4P39038 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cdh4P39038 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.01□□□□□ -0.65
Cdh4P39038 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.01□□□□□ -0.65
Cdh4P39038 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.01□□□□□ -0.65
Cdh4P39038 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.01□□□□□ -0.65
Cdh4P39038 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms