Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rfc1P35601 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.09□□□□□ -0.47
Rfc1P35601 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rfc1P35601 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC12.09□□□□□ -0.47
Rfc1P35601 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.09□□□□□ -0.47
Rfc1P35601 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rfc1P35601 Gm12058-201ENSMUST00000118614 437 ntBASIC12.09□□□□□ -0.47
Rfc1P35601 Gm13875-201ENSMUST00000120162 282 ntBASIC12.09□□□□□ -0.47
Rfc1P35601 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.09□□□□□ -0.47
Rfc1P35601 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rfc1P35601 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.09□□□□□ -0.47
Rfc1P35601 Gm38002-201ENSMUST00000193255 180 ntBASIC12.09□□□□□ -0.47
Rfc1P35601 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.09□□□□□ -0.47
Rfc1P35601 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.09□□□□□ -0.47
Rfc1P35601 Gm19309-201ENSMUST00000218295 205 ntBASIC12.09□□□□□ -0.47
Rfc1P35601 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Gm25857-201ENSMUST00000082788 129 ntBASIC12.09□□□□□ -0.47
Rfc1P35601 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.09□□□□□ -0.47
Rfc1P35601 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rfc1P35601 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rfc1P35601 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.09□□□□□ -0.47
Rfc1P35601 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.08□□□□□ -0.47
Rfc1P35601 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Rfc1P35601 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rfc1P35601 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.08□□□□□ -0.47
Rfc1P35601 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.47
Rfc1P35601 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Rfc1P35601 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.08□□□□□ -0.48
Rfc1P35601 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfc1P35601 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfc1P35601 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rfc1P35601 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfc1P35601 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfc1P35601 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfc1P35601 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.08□□□□□ -0.48
Rfc1P35601 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rfc1P35601 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfc1P35601 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.08□□□□□ -0.48
Rfc1P35601 Rprl1-201ENSMUST00000158050 327 ntBASIC12.08□□□□□ -0.48
Rfc1P35601 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.08□□□□□ -0.48
Rfc1P35601 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.08□□□□□ -0.48
Rfc1P35601 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfc1P35601 Gm37201-201ENSMUST00000191845 523 ntBASIC12.08□□□□□ -0.48
Rfc1P35601 Gm18711-201ENSMUST00000199341 750 ntBASIC12.08□□□□□ -0.48
Rfc1P35601 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfc1P35601 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfc1P35601 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.08□□□□□ -0.48
Rfc1P35601 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfc1P35601 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfc1P35601 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rfc1P35601 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rfc1P35601 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfc1P35601 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rfc1P35601 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfc1P35601 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rfc1P35601 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfc1P35601 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.08□□□□□ -0.48
Rfc1P35601 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.08□□□□□ -0.48
Rfc1P35601 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfc1P35601 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfc1P35601 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfc1P35601 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rfc1P35601 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rfc1P35601 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rfc1P35601 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.08□□□□□ -0.48
Rfc1P35601 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.08□□□□□ -0.48
Rfc1P35601 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.08□□□□□ -0.48
Rfc1P35601 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Rfc1P35601 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.07□□□□□ -0.48
Rfc1P35601 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rfc1P35601 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Rfc1P35601 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rfc1P35601 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms