Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Rom1P32958 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 CT010447.1-201ENSMUST00000225657 1608 ntBASIC9.06□□□□□ -0.96
Rom1P32958 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Rom1P32958 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC9.06□□□□□ -0.96
Rom1P32958 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC9.06□□□□□ -0.96
Rom1P32958 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC9.06□□□□□ -0.96
Rom1P32958 Gm2639-201ENSMUST00000156881 1297 ntBASIC9.06□□□□□ -0.96
Rom1P32958 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.06□□□□□ -0.96
Rom1P32958 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC9.06□□□□□ -0.96
Rom1P32958 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC9.06□□□□□ -0.96
Rom1P32958 Gm6222-202ENSMUST00000182143 629 ntBASIC9.06□□□□□ -0.96
Rom1P32958 Gm2467-201ENSMUST00000182266 1010 ntBASIC9.06□□□□□ -0.96
Rom1P32958 Gm27839-201ENSMUST00000184242 106 ntBASIC9.06□□□□□ -0.96
Rom1P32958 Mir8093-201ENSMUST00000185043 137 ntBASIC9.06□□□□□ -0.96
Rom1P32958 Gm34767-201ENSMUST00000191813 1062 ntBASIC9.06□□□□□ -0.96
Rom1P32958 Gm42627-201ENSMUST00000197347 224 ntBASIC9.06□□□□□ -0.96
Rom1P32958 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC9.06□□□□□ -0.96
Rom1P32958 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC9.06□□□□□ -0.96
Rom1P32958 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC9.06□□□□□ -0.96
Rom1P32958 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.06□□□□□ -0.96
Rom1P32958 AC122273.1-201ENSMUST00000213634 2327 ntBASIC9.06□□□□□ -0.96
Rom1P32958 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC9.06□□□□□ -0.96
Rom1P32958 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Rom1P32958 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
Rom1P32958 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.06□□□□□ -0.96
Rom1P32958 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Rom1P32958 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Rom1P32958 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Rom1P32958 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Rom1P32958 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Rom1P32958 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Rom1P32958 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.05□□□□□ -0.96
Rom1P32958 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC9.05□□□□□ -0.96
Rom1P32958 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.05□□□□□ -0.96
Rom1P32958 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Rom1P32958 Gm29127-201ENSMUST00000188304 517 ntBASIC9.05□□□□□ -0.96
Rom1P32958 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Snora73a-201ENSMUST00000082453 205 ntBASIC9.05□□□□□ -0.96
Rom1P32958 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Rom1P32958 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Rom1P32958 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Rom1P32958 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC9.05□□□□□ -0.96
Rom1P32958 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC9.05□□□□□ -0.96
Rom1P32958 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Rom1P32958 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rom1P32958 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Rom1P32958 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms