Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nckap1P28660 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Nckap1P28660 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nckap1P28660 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nckap1P28660 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nckap1P28660 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nckap1P28660 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.47□□□□□ -0.57
Nckap1P28660 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.47□□□□□ -0.57
Nckap1P28660 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nckap1P28660 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nckap1P28660 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nckap1P28660 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nckap1P28660 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.46□□□□□ -0.57
Nckap1P28660 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nckap1P28660 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nckap1P28660 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Nckap1P28660 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nckap1P28660 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.57
Nckap1P28660 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nckap1P28660 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nckap1P28660 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nckap1P28660 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nckap1P28660 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nckap1P28660 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nckap1P28660 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nckap1P28660 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nckap1P28660 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nckap1P28660 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Nckap1P28660 Gm25063-201ENSMUST00000104666 94 ntBASIC11.46□□□□□ -0.57
Nckap1P28660 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.46□□□□□ -0.57
Nckap1P28660 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.46□□□□□ -0.57
Nckap1P28660 Gm37284-201ENSMUST00000193607 539 ntBASIC11.46□□□□□ -0.57
Nckap1P28660 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nckap1P28660 Gm44158-201ENSMUST00000203881 505 ntBASIC11.46□□□□□ -0.57
Nckap1P28660 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.46□□□□□ -0.57
Nckap1P28660 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nckap1P28660 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nckap1P28660 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.46□□□□□ -0.57
Nckap1P28660 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.46□□□□□ -0.57
Nckap1P28660 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nckap1P28660 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nckap1P28660 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Nckap1P28660 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Nckap1P28660 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Nckap1P28660 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nckap1P28660 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.46□□□□□ -0.58
Nckap1P28660 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
Nckap1P28660 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Nckap1P28660 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nckap1P28660 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nckap1P28660 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Nckap1P28660 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Nckap1P28660 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nckap1P28660 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nckap1P28660 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nckap1P28660 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.46□□□□□ -0.58
Nckap1P28660 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nckap1P28660 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nckap1P28660 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.45□□□□□ -0.58
Nckap1P28660 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.45□□□□□ -0.58
Nckap1P28660 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nckap1P28660 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nckap1P28660 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nckap1P28660 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.45□□□□□ -0.58
Nckap1P28660 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.45□□□□□ -0.58
Nckap1P28660 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nckap1P28660 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nckap1P28660 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nckap1P28660 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nckap1P28660 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nckap1P28660 Gm11500-201ENSMUST00000118237 601 ntBASIC11.45□□□□□ -0.58
Nckap1P28660 Gm16219-201ENSMUST00000120096 274 ntBASIC11.45□□□□□ -0.58
Nckap1P28660 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.45□□□□□ -0.58
Nckap1P28660 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.45□□□□□ -0.58
Nckap1P28660 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.45□□□□□ -0.58
Nckap1P28660 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.45□□□□□ -0.58
Nckap1P28660 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nckap1P28660 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.45□□□□□ -0.58
Nckap1P28660 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nckap1P28660 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.45□□□□□ -0.58
Nckap1P28660 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Nckap1P28660 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Nckap1P28660 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nckap1P28660 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.45□□□□□ -0.58
Nckap1P28660 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.45□□□□□ -0.58
Nckap1P28660 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.45□□□□□ -0.58
Nckap1P28660 Gm5468-202ENSMUST00000227851 682 ntBASIC11.45□□□□□ -0.58
Nckap1P28660 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.45□□□□□ -0.58
Nckap1P28660 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.45□□□□□ -0.58
Nckap1P28660 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nckap1P28660 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.45□□□□□ -0.58
Nckap1P28660 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nckap1P28660 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.45□□□□□ -0.58
Nckap1P28660 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nckap1P28660 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.45□□□□□ -0.58
Nckap1P28660 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nckap1P28660 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nckap1P28660 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nckap1P28660 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nckap1P28660 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms