Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tnfrsf1aP25118 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Tnfrsf1aP25118 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Gm15711-201ENSMUST00000118889 535 ntBASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Gm3332-201ENSMUST00000189337 928 ntBASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Gm5982-201ENSMUST00000196234 512 ntBASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Gm43966-201ENSMUST00000203301 612 ntBASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 AC159747.1-201ENSMUST00000219903 265 ntBASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Tnfrsf1aP25118 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Gm23949-201ENSMUST00000104027 127 ntBASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Gm23596-201ENSMUST00000104304 132 ntBASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Gm12857-201ENSMUST00000117678 592 ntBASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Gm12749-201ENSMUST00000122138 1159 ntBASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms