Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Cdx1P18111 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Cdx1P18111 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC9.32□□□□□ -0.92
Cdx1P18111 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Cdx1P18111 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Cdx1P18111 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Cdx1P18111 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Cdx1P18111 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC9.32□□□□□ -0.92
Cdx1P18111 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Cdx1P18111 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Cdx1P18111 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
Cdx1P18111 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Cdx1P18111 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Gm2383-201ENSMUST00000181461 807 ntBASIC9.32□□□□□ -0.92
Cdx1P18111 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Cdx1P18111 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC9.32□□□□□ -0.92
Cdx1P18111 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Cdx1P18111 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Cdx1P18111 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Cdx1P18111 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.32□□□□□ -0.92
Cdx1P18111 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Cdx1P18111 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Cdx1P18111 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Cdx1P18111 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Cdx1P18111 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Cdx1P18111 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.31□□□□□ -0.92
Cdx1P18111 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx1P18111 AC108858.2-201ENSMUST00000228186 1425 ntBASIC9.31□□□□□ -0.92
Cdx1P18111 AC115891.3-201ENSMUST00000219161 2472 ntBASIC9.31□□□□□ -0.92
Cdx1P18111 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx1P18111 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx1P18111 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Cdx1P18111 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Cdx1P18111 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Cdx1P18111 AC126262.1-201ENSMUST00000221802 1904 ntBASIC9.31□□□□□ -0.92
Cdx1P18111 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx1P18111 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Cdx1P18111 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Cdx1P18111 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx1P18111 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Cdx1P18111 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx1P18111 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx1P18111 Gm12502-201ENSMUST00000120197 444 ntBASIC9.31□□□□□ -0.92
Cdx1P18111 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx1P18111 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC9.31□□□□□ -0.92
Cdx1P18111 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx1P18111 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC9.31□□□□□ -0.92
Cdx1P18111 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Cdx1P18111 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC9.31□□□□□ -0.92
Cdx1P18111 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC9.31□□□□□ -0.92
Cdx1P18111 Gm18753-201ENSMUST00000201000 566 ntBASIC9.31□□□□□ -0.92
Cdx1P18111 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.31□□□□□ -0.92
Cdx1P18111 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.31□□□□□ -0.92
Cdx1P18111 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx1P18111 Gm30285-201ENSMUST00000214614 422 ntBASIC9.31□□□□□ -0.92
Cdx1P18111 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.31□□□□□ -0.92
Cdx1P18111 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Cdx1P18111 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.31□□□□□ -0.92
Cdx1P18111 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx1P18111 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Cdx1P18111 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC9.31□□□□□ -0.92
Cdx1P18111 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC9.31□□□□□ -0.92
Cdx1P18111 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx1P18111 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx1P18111 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx1P18111 Gm9035-201ENSMUST00000218318 1697 ntBASIC9.31□□□□□ -0.92
Cdx1P18111 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx1P18111 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx1P18111 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Cdx1P18111 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms