Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Hoxc6P10629 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Hoxc6P10629 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hoxc6P10629 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxc6P10629 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Cog3-203ENSMUST00000227473 4197 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Hoxc6P10629 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hoxc6P10629 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.72□□□□□ -0.37
Hoxc6P10629 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hoxc6P10629 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.72□□□□□ -0.37
Hoxc6P10629 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Gm25226-201ENSMUST00000158198 123 ntBASIC12.72□□□□□ -0.37
Hoxc6P10629 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.72□□□□□ -0.37
Hoxc6P10629 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.72□□□□□ -0.37
Hoxc6P10629 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hoxc6P10629 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxc6P10629 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.72□□□□□ -0.37
Hoxc6P10629 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.72□□□□□ -0.37
Hoxc6P10629 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.72□□□□□ -0.37
Hoxc6P10629 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.72□□□□□ -0.37
Hoxc6P10629 Capsl-202ENSMUST00000226688 739 ntBASIC12.72□□□□□ -0.37
Hoxc6P10629 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxc6P10629 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.72□□□□□ -0.37
Hoxc6P10629 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.72□□□□□ -0.37
Hoxc6P10629 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxc6P10629 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Hoxc6P10629 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
Hoxc6P10629 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Hoxc6P10629 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC12.71□□□□□ -0.37
Hoxc6P10629 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
Hoxc6P10629 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.71□□□□□ -0.37
Hoxc6P10629 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 Gm22594-201ENSMUST00000104251 130 ntBASIC12.71□□□□□ -0.37
Hoxc6P10629 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Hoxc6P10629 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 Gm26272-201ENSMUST00000179241 132 ntBASIC12.71□□□□□ -0.37
Hoxc6P10629 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.71□□□□□ -0.37
Hoxc6P10629 Gm5267-201ENSMUST00000191574 1045 ntBASIC12.71□□□□□ -0.37
Hoxc6P10629 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.71□□□□□ -0.37
Hoxc6P10629 Gm35960-201ENSMUST00000202712 767 ntBASIC12.71□□□□□ -0.37
Hoxc6P10629 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.71□□□□□ -0.37
Hoxc6P10629 Gm9102-201ENSMUST00000219250 465 ntBASIC12.71□□□□□ -0.37
Hoxc6P10629 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12.71□□□□□ -0.37
Hoxc6P10629 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.71□□□□□ -0.37
Hoxc6P10629 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Hoxc6P10629 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Hoxc6P10629 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxc6P10629 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxc6P10629 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxc6P10629 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.71□□□□□ -0.38
Hoxc6P10629 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.71□□□□□ -0.38
Hoxc6P10629 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxc6P10629 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hoxc6P10629 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms