Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 Gm43972-201ENSMUST00000181398 1467 ntBASIC13.56□□□□□ -0.24
Col3a1P08121 Gm5434-202ENSMUST00000222384 1451 ntBASIC13.56□□□□□ -0.24
Col3a1P08121 Gm5434-201ENSMUST00000071825 1451 ntBASIC13.56□□□□□ -0.24
Col3a1P08121 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.56□□□□□ -0.24
Col3a1P08121 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Col3a1P08121 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col3a1P08121 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Gm14592-201ENSMUST00000117201 560 ntBASIC13.55□□□□□ -0.24
Col3a1P08121 Gm11619-201ENSMUST00000117474 237 ntBASIC13.55□□□□□ -0.24
Col3a1P08121 Gm12943-201ENSMUST00000119616 210 ntBASIC13.55□□□□□ -0.24
Col3a1P08121 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC13.55□□□□□ -0.24
Col3a1P08121 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col3a1P08121 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col3a1P08121 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC13.55□□□□□ -0.24
Col3a1P08121 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.55□□□□□ -0.24
Col3a1P08121 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.55□□□□□ -0.24
Col3a1P08121 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC13.55□□□□□ -0.24
Col3a1P08121 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC13.55□□□□□ -0.24
Col3a1P08121 AC160929.1-201ENSMUST00000221247 415 ntBASIC13.55□□□□□ -0.24
Col3a1P08121 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC13.55□□□□□ -0.24
Col3a1P08121 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC13.55□□□□□ -0.24
Col3a1P08121 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.55□□□□□ -0.24
Col3a1P08121 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Col3a1P08121 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.55□□□□□ -0.24
Col3a1P08121 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC13.55□□□□□ -0.24
Col3a1P08121 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
Col3a1P08121 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Col3a1P08121 Paupar-201ENSMUST00000194826 3482 ntBASIC13.55□□□□□ -0.24
Col3a1P08121 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC13.55□□□□□ -0.24
Col3a1P08121 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Col3a1P08121 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Col3a1P08121 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Snord55-201ENSMUST00000174939 79 ntBASIC13.55□□□□□ -0.24
Col3a1P08121 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC13.55□□□□□ -0.24
Col3a1P08121 Platr10-202ENSMUST00000191479 818 ntBASIC13.55□□□□□ -0.24
Col3a1P08121 Gm44647-201ENSMUST00000207402 428 ntBASIC13.55□□□□□ -0.24
Col3a1P08121 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col3a1P08121 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col3a1P08121 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col3a1P08121 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col3a1P08121 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col3a1P08121 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col3a1P08121 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col3a1P08121 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col3a1P08121 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col3a1P08121 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col3a1P08121 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Col3a1P08121 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col3a1P08121 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col3a1P08121 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col3a1P08121 AC109214.1-201ENSMUST00000219520 1372 ntBASIC13.54□□□□□ -0.24
Col3a1P08121 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col3a1P08121 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col3a1P08121 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col3a1P08121 Gm5944-201ENSMUST00000118182 1001 ntBASIC13.54□□□□□ -0.24
Col3a1P08121 Gm15196-201ENSMUST00000121406 482 ntBASIC13.54□□□□□ -0.24
Col3a1P08121 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col3a1P08121 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col3a1P08121 Gm17214-201ENSMUST00000164501 541 ntBASIC13.54□□□□□ -0.24
Col3a1P08121 Gm5529-201ENSMUST00000165691 891 ntBASIC13.54□□□□□ -0.24
Col3a1P08121 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col3a1P08121 Gm18014-201ENSMUST00000183369 817 ntBASIC13.54□□□□□ -0.24
Col3a1P08121 Gm5700-201ENSMUST00000191483 989 ntBASIC13.54□□□□□ -0.24
Col3a1P08121 Gm20781-201ENSMUST00000193154 693 ntBASIC13.54□□□□□ -0.24
Col3a1P08121 Gm21736-201ENSMUST00000195399 693 ntBASIC13.54□□□□□ -0.24
Col3a1P08121 Gm31274-201ENSMUST00000197356 229 ntBASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms