Protein–RNA interactions for Protein: P07309

Ttr, Transthyretin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TtrP07309 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
TtrP07309 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC8.29□□□□□ -1.08
TtrP07309 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC8.29□□□□□ -1.08
TtrP07309 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TtrP07309 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
TtrP07309 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC8.28□□□□□ -1.08
TtrP07309 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC8.28□□□□□ -1.08
TtrP07309 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
TtrP07309 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Tsc2-203ENSMUST00000226284 6266 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
TtrP07309 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
TtrP07309 Gm14150-201ENSMUST00000122404 1354 ntBASIC8.28□□□□□ -1.08
TtrP07309 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC8.28□□□□□ -1.08
TtrP07309 Gm11989-201ENSMUST00000117240 672 ntBASIC8.28□□□□□ -1.08
TtrP07309 Gm11362-201ENSMUST00000118838 850 ntBASIC8.28□□□□□ -1.08
TtrP07309 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
TtrP07309 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC8.28□□□□□ -1.08
TtrP07309 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC8.28□□□□□ -1.08
TtrP07309 Gm13316-201ENSMUST00000140537 691 ntBASIC8.28□□□□□ -1.08
TtrP07309 Gm24845-201ENSMUST00000158034 109 ntBASIC8.28□□□□□ -1.08
TtrP07309 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC8.28□□□□□ -1.08
TtrP07309 Gm9230-201ENSMUST00000188228 532 ntBASIC8.28□□□□□ -1.08
TtrP07309 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC8.28□□□□□ -1.08
TtrP07309 Gm43966-201ENSMUST00000203301 612 ntBASIC8.28□□□□□ -1.08
TtrP07309 Gm44415-201ENSMUST00000204151 2112 ntBASIC8.28□□□□□ -1.08
TtrP07309 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
TtrP07309 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 AC154462.2-201ENSMUST00000227519 370 ntBASIC8.28□□□□□ -1.08
TtrP07309 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Gm29358-202ENSMUST00000187941 3227 ntBASIC8.28□□□□□ -1.08
TtrP07309 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
TtrP07309 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
TtrP07309 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Gm7967-202ENSMUST00000191042 5042 ntBASIC8.28□□□□□ -1.08
TtrP07309 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
TtrP07309 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
TtrP07309 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
TtrP07309 Gm29245-201ENSMUST00000187332 1416 ntBASIC8.28□□□□□ -1.08
TtrP07309 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TtrP07309 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
TtrP07309 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
TtrP07309 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
TtrP07309 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.08
TtrP07309 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
TtrP07309 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Gm45206-201ENSMUST00000206885 2285 ntBASIC8.27□□□□□ -1.09
TtrP07309 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.09
TtrP07309 AC167565.1-201ENSMUST00000226980 1833 ntBASIC8.27□□□□□ -1.09
TtrP07309 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC8.27□□□□□ -1.09
TtrP07309 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
TtrP07309 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TtrP07309 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC8.27□□□□□ -1.09
TtrP07309 Gm4986-201ENSMUST00000119731 549 ntBASIC8.27□□□□□ -1.09
TtrP07309 Gm13297-201ENSMUST00000120205 934 ntBASIC8.27□□□□□ -1.09
TtrP07309 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC8.27□□□□□ -1.09
TtrP07309 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC8.27□□□□□ -1.09
TtrP07309 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
TtrP07309 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC8.27□□□□□ -1.09
TtrP07309 Gm42627-201ENSMUST00000197347 224 ntBASIC8.27□□□□□ -1.09
TtrP07309 Gm8956-201ENSMUST00000203939 825 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms