Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Ebf3O08791 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Gm12419-201ENSMUST00000116649 636 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.97□□□□□ -0.49
Ebf3O08791 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.97□□□□□ -0.49
Ebf3O08791 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.97□□□□□ -0.49
Ebf3O08791 Gm28937-201ENSMUST00000185413 695 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 Gm29400-201ENSMUST00000187208 695 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 Gm8531-201ENSMUST00000188319 893 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 Gm28662-201ENSMUST00000188446 695 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 Gm28251-201ENSMUST00000188835 695 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 Gm37318-201ENSMUST00000194325 695 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 Gm38017-201ENSMUST00000194768 695 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 Gm37287-201ENSMUST00000195449 695 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 Gm37793-201ENSMUST00000195548 695 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 Gm44315-201ENSMUST00000203041 219 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 Gm44158-201ENSMUST00000203881 505 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 Gm8342-201ENSMUST00000209839 757 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Ebf3O08791 Gm45594-201ENSMUST00000211717 241 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.97□□□□□ -0.49
Ebf3O08791 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ebf3O08791 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ebf3O08791 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ebf3O08791 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.97□□□□□ -0.49
Ebf3O08791 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.97□□□□□ -0.49
Ebf3O08791 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.97□□□□□ -0.49
Ebf3O08791 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.97□□□□□ -0.49
Ebf3O08791 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf3O08791 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.96□□□□□ -0.49
Ebf3O08791 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ebf3O08791 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf3O08791 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.96□□□□□ -0.49
Ebf3O08791 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf3O08791 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf3O08791 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf3O08791 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf3O08791 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf3O08791 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf3O08791 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf3O08791 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf3O08791 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ebf3O08791 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.96□□□□□ -0.49
Ebf3O08791 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.96□□□□□ -0.49
Ebf3O08791 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.96□□□□□ -0.49
Ebf3O08791 Gm8459-201ENSMUST00000162504 760 ntBASIC11.96□□□□□ -0.49
Ebf3O08791 Gm6407-201ENSMUST00000176468 549 ntBASIC11.96□□□□□ -0.49
Ebf3O08791 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf3O08791 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.96□□□□□ -0.49
Ebf3O08791 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.96□□□□□ -0.49
Ebf3O08791 Gm8574-201ENSMUST00000203207 924 ntBASIC11.96□□□□□ -0.49
Ebf3O08791 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.96□□□□□ -0.49
Ebf3O08791 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf3O08791 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.96□□□□□ -0.49
Ebf3O08791 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ebf3O08791 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ebf3O08791 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
Ebf3O08791 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf3O08791 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf3O08791 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf3O08791 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
Ebf3O08791 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.96□□□□□ -0.5
Ebf3O08791 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf3O08791 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf3O08791 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf3O08791 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf3O08791 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Ebf3O08791 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Ebf3O08791 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf3O08791 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.96□□□□□ -0.5
Ebf3O08791 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf3O08791 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf3O08791 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.96□□□□□ -0.5
Ebf3O08791 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.96□□□□□ -0.5
Ebf3O08791 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf3O08791 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms