Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Pcdh1F7BJK1 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh1F7BJK1 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh1F7BJK1 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh1F7BJK1 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh1F7BJK1 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh1F7BJK1 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh1F7BJK1 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh1F7BJK1 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Pcdh1F7BJK1 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Pcdh1F7BJK1 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.35□□□□□ -0.75
Pcdh1F7BJK1 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh1F7BJK1 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh1F7BJK1 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh1F7BJK1 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Gm43630-201ENSMUST00000201550 776 ntBASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Gm45598-202ENSMUST00000210719 986 ntBASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh1F7BJK1 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Gm23270-201ENSMUST00000104055 131 ntBASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Gm14071-201ENSMUST00000117817 509 ntBASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Mir1938-201ENSMUST00000158746 100 ntBASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms