Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.7□□□□□ -0.54
Ccdc149F6V035 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.69□□□□□ -0.54
Ccdc149F6V035 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Gm6407-201ENSMUST00000176468 549 ntBASIC11.69□□□□□ -0.54
Ccdc149F6V035 Gm29410-201ENSMUST00000188383 694 ntBASIC11.69□□□□□ -0.54
Ccdc149F6V035 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Gm42816-201ENSMUST00000198433 325 ntBASIC11.69□□□□□ -0.54
Ccdc149F6V035 Gm18561-201ENSMUST00000206027 804 ntBASIC11.69□□□□□ -0.54
Ccdc149F6V035 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.69□□□□□ -0.54
Ccdc149F6V035 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.69□□□□□ -0.54
Ccdc149F6V035 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ccdc149F6V035 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.69□□□□□ -0.54
Ccdc149F6V035 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Gm10263-201ENSMUST00000085163 300 ntBASIC11.69□□□□□ -0.54
Ccdc149F6V035 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.69□□□□□ -0.54
Ccdc149F6V035 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.69□□□□□ -0.54
Ccdc149F6V035 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ccdc149F6V035 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ccdc149F6V035 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.68□□□□□ -0.54
Ccdc149F6V035 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.68□□□□□ -0.54
Ccdc149F6V035 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ccdc149F6V035 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Gm14219-201ENSMUST00000120414 288 ntBASIC11.68□□□□□ -0.54
Ccdc149F6V035 Gm13117-201ENSMUST00000120894 691 ntBASIC11.68□□□□□ -0.54
Ccdc149F6V035 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.68□□□□□ -0.54
Ccdc149F6V035 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Gm25492-201ENSMUST00000157383 129 ntBASIC11.68□□□□□ -0.54
Ccdc149F6V035 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.68□□□□□ -0.54
Ccdc149F6V035 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccdc149F6V035 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.68□□□□□ -0.54
Ccdc149F6V035 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.68□□□□□ -0.54
Ccdc149F6V035 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.68□□□□□ -0.54
Ccdc149F6V035 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc149F6V035 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 142.2 ms