Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Mrpl51-201ENSMUST00000032485 3427 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Myadm-201ENSMUST00000096744 2814 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Acad10-202ENSMUST00000111770 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nkx6-2D3Z4R4 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Gm10634-202ENSMUST00000188891 2464 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Gm9220-201ENSMUST00000190721 2544 ntBASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Zmat2-201ENSMUST00000001419 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Gm16296-201ENSMUST00000159905 325 ntBASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Hist1h2al-201ENSMUST00000091708 339 ntBASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Gm43823-201ENSMUST00000197391 1808 ntBASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Gm38910-201ENSMUST00000204630 2448 ntBASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Tyw3-201ENSMUST00000052774 4490 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nkx6-2D3Z4R4 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Nkx6-2D3Z4R4 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nkx6-2D3Z4R4 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nkx6-2D3Z4R4 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nkx6-2D3Z4R4 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nkx6-2D3Z4R4 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nkx6-2D3Z4R4 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nkx6-2D3Z4R4 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.22□□□□□ -0.93
Nkx6-2D3Z4R4 Gad1-201ENSMUST00000094934 3355 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nkx6-2D3Z4R4 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nkx6-2D3Z4R4 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Nkx6-2D3Z4R4 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.22□□□□□ -0.93
Nkx6-2D3Z4R4 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Nkx6-2D3Z4R4 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nkx6-2D3Z4R4 Eif4e1b-206ENSMUST00000132728 1897 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nkx6-2D3Z4R4 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nkx6-2D3Z4R4 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Nkx6-2D3Z4R4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nkx6-2D3Z4R4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms