Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Gm6329-201ENSMUST00000209210 936 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Gm28645-201ENSMUST00000185859 564 ntBASIC5.87□□□□□ -1.47
Ubr4A2AN08 Gm42875-201ENSMUST00000197674 1015 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Gm33053-201ENSMUST00000215275 1144 ntTSL 5 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 AC124400.2-201ENSMUST00000224939 253 ntBASIC5.87□□□□□ -1.47
Ubr4A2AN08 Serpina10-202ENSMUST00000121625 1424 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Gm10537-201ENSMUST00000192625 1698 ntBASIC5.87□□□□□ -1.47
Ubr4A2AN08 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Gm13021-201ENSMUST00000135716 407 ntTSL 5 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Gm38839-201ENSMUST00000203833 633 ntTSL 2 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Ang2-202ENSMUST00000228835 896 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Gm10108-201ENSMUST00000078246 319 ntBASIC5.87□□□□□ -1.47
Ubr4A2AN08 Gm10617-201ENSMUST00000098368 1172 ntBASIC5.87□□□□□ -1.47
Ubr4A2AN08 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Dhrs7b-201ENSMUST00000042281 1553 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Ssr3-202ENSMUST00000119896 1469 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm12011-201ENSMUST00000119734 618 ntBASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm11608-202ENSMUST00000153049 877 ntTSL 3 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm21963-201ENSMUST00000179519 330 ntBASIC5.86□□□□□ -1.47
Ubr4A2AN08 Spata45-202ENSMUST00000192151 443 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 AC165260.5-201ENSMUST00000224640 1247 ntBASIC5.86□□□□□ -1.47
Ubr4A2AN08 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm29601-201ENSMUST00000187961 1349 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Mir6360-201ENSMUST00000184278 126 ntBASIC5.86□□□□□ -1.47
Ubr4A2AN08 Gm29487-201ENSMUST00000190146 256 ntBASIC5.86□□□□□ -1.47
Ubr4A2AN08 AC154528.3-201ENSMUST00000228011 679 ntBASIC5.86□□□□□ -1.47
Ubr4A2AN08 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Ubr4A2AN08 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Ubr4A2AN08 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms