Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Tubd1Q9R1K7 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.65□□□□□ -0.54
Tubd1Q9R1K7 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Tubd1Q9R1K7 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Tubd1Q9R1K7 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Tubd1Q9R1K7 Gm44100-201ENSMUST00000204329 436 ntBASIC11.65□□□□□ -0.54
Tubd1Q9R1K7 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.65□□□□□ -0.54
Tubd1Q9R1K7 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.65□□□□□ -0.54
Tubd1Q9R1K7 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubd1Q9R1K7 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Tubd1Q9R1K7 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubd1Q9R1K7 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tubd1Q9R1K7 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubd1Q9R1K7 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.65□□□□□ -0.54
Tubd1Q9R1K7 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubd1Q9R1K7 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tubd1Q9R1K7 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Tubd1Q9R1K7 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tubd1Q9R1K7 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.65□□□□□ -0.55
Tubd1Q9R1K7 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Tubd1Q9R1K7 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Tubd1Q9R1K7 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tubd1Q9R1K7 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
Tubd1Q9R1K7 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Tubd1Q9R1K7 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tubd1Q9R1K7 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tubd1Q9R1K7 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Gm9211-201ENSMUST00000182882 975 ntBASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubd1Q9R1K7 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Gm25076-201ENSMUST00000104098 132 ntBASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Gm10731-201ENSMUST00000181171 448 ntBASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Gm3551-201ENSMUST00000190750 664 ntBASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Gm5468-202ENSMUST00000227851 682 ntBASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubd1Q9R1K7 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms