Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Gm14585-201ENSMUST00000120713 634 ntBASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Gm22846-201ENSMUST00000157706 270 ntBASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Upk3aQ9JKX8 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm8111-201ENSMUST00000117659 987 ntBASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm12218-201ENSMUST00000117666 399 ntBASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm15528-201ENSMUST00000117821 864 ntBASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm12463-201ENSMUST00000118271 849 ntBASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm16219-201ENSMUST00000120096 274 ntBASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm14395-201ENSMUST00000120494 563 ntBASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm29067-201ENSMUST00000190821 470 ntBASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm42867-201ENSMUST00000202995 469 ntBASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm44315-201ENSMUST00000203041 219 ntBASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm43916-201ENSMUST00000205062 967 ntBASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm23105-201ENSMUST00000083719 134 ntBASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms