Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3bQ9ES34 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ube3bQ9ES34 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3bQ9ES34 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3bQ9ES34 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3bQ9ES34 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3bQ9ES34 Gm9723-201ENSMUST00000192100 457 ntBASIC13.71□□□□□ -0.21
Ube3bQ9ES34 Gm17877-201ENSMUST00000192578 814 ntBASIC13.71□□□□□ -0.21
Ube3bQ9ES34 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3bQ9ES34 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.71□□□□□ -0.21
Ube3bQ9ES34 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.71□□□□□ -0.21
Ube3bQ9ES34 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3bQ9ES34 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.71□□□□□ -0.21
Ube3bQ9ES34 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.71□□□□□ -0.21
Ube3bQ9ES34 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.71□□□□□ -0.21
Ube3bQ9ES34 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3bQ9ES34 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3bQ9ES34 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ube3bQ9ES34 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.71□□□□□ -0.21
Ube3bQ9ES34 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ube3bQ9ES34 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Ube3bQ9ES34 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ube3bQ9ES34 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ube3bQ9ES34 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ube3bQ9ES34 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ube3bQ9ES34 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Gm42651-201ENSMUST00000199851 1339 ntBASIC13.7□□□□□ -0.22
Ube3bQ9ES34 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Gm25766-201ENSMUST00000104101 131 ntBASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Gm12218-201ENSMUST00000117666 399 ntBASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Gm13422-201ENSMUST00000118834 504 ntBASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Gm13333-201ENSMUST00000119424 781 ntBASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 AC132446.1-201ENSMUST00000222655 226 ntBASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Gm10254-201ENSMUST00000052888 867 ntBASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Gm14667-201ENSMUST00000119448 1350 ntBASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.7□□□□□ -0.22
Ube3bQ9ES34 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Gm9415-201ENSMUST00000200462 1321 ntBASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Gm8302-201ENSMUST00000119217 852 ntBASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Mir1901-201ENSMUST00000122616 78 ntBASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Gm24992-201ENSMUST00000157412 130 ntBASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Mir1956-201ENSMUST00000157748 65 ntBASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Mir7051-201ENSMUST00000184167 73 ntBASIC13.69□□□□□ -0.22
Ube3bQ9ES34 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Gm10752-201ENSMUST00000218348 729 ntBASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.69□□□□□ -0.22
Ube3bQ9ES34 AC132881.2-201ENSMUST00000225474 709 ntBASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Gm10263-201ENSMUST00000085163 300 ntBASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Gm45416-201ENSMUST00000209713 2201 ntBASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ube3bQ9ES34 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms