Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Gm17825-201ENSMUST00000206836 794 ntBASIC11.95□□□□□ -0.5
Cpne8Q9DC53 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Gm18730-201ENSMUST00000218038 343 ntBASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Gm10288-201ENSMUST00000084614 537 ntBASIC11.95□□□□□ -0.5
Cpne8Q9DC53 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.95□□□□□ -0.5
Cpne8Q9DC53 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cpne8Q9DC53 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Gm25148-201ENSMUST00000104611 123 ntBASIC11.94□□□□□ -0.5
Cpne8Q9DC53 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Gm7504-201ENSMUST00000201449 424 ntBASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cpne8Q9DC53 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Gm15374-201ENSMUST00000119313 844 ntBASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Gm14017-201ENSMUST00000121934 386 ntBASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Gm24990-201ENSMUST00000157406 323 ntBASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Gm18367-201ENSMUST00000176139 600 ntBASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Gm2965-201ENSMUST00000198365 343 ntBASIC11.93□□□□□ -0.5
Cpne8Q9DC53 AU022133-201ENSMUST00000200601 873 ntBASIC11.93□□□□□ -0.5
Cpne8Q9DC53 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Gm21811-201ENSMUST00000096485 930 ntBASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cpne8Q9DC53 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms