Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC15.11■□□□□ 0.01
U2af1Q9D883 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
U2af1Q9D883 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC15.11■□□□□ 0.01
U2af1Q9D883 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
U2af1Q9D883 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
U2af1Q9D883 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
U2af1Q9D883 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
U2af1Q9D883 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC15.1■□□□□ 0.01
U2af1Q9D883 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
U2af1Q9D883 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
U2af1Q9D883 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
U2af1Q9D883 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC15.1■□□□□ 0.01
U2af1Q9D883 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC15.1■□□□□ 0.01
U2af1Q9D883 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Gm25492-201ENSMUST00000157383 129 ntBASIC15.1■□□□□ 0.01
U2af1Q9D883 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC15.1■□□□□ 0.01
U2af1Q9D883 Gm8365-201ENSMUST00000197334 648 ntBASIC15.1■□□□□ 0.01
U2af1Q9D883 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC15.1■□□□□ 0.01
U2af1Q9D883 CT030170.2-201ENSMUST00000223267 126 ntBASIC15.1■□□□□ 0.01
U2af1Q9D883 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
U2af1Q9D883 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
U2af1Q9D883 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
U2af1Q9D883 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
U2af1Q9D883 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
U2af1Q9D883 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Gm37542-201ENSMUST00000192563 2832 ntBASIC15.1■□□□□ 0.01
U2af1Q9D883 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
U2af1Q9D883 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
U2af1Q9D883 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
U2af1Q9D883 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
U2af1Q9D883 Gm9544-201ENSMUST00000223349 2482 ntBASIC15.09■□□□□ 0.01
U2af1Q9D883 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
U2af1Q9D883 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
U2af1Q9D883 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC15.09■□□□□ 0.01
U2af1Q9D883 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
U2af1Q9D883 AC126257.2-201ENSMUST00000215507 2300 ntBASIC15.09■□□□□ 0.01
U2af1Q9D883 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
U2af1Q9D883 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
U2af1Q9D883 Gm25148-201ENSMUST00000104611 123 ntBASIC15.09■□□□□ 0.01
U2af1Q9D883 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
U2af1Q9D883 Gm8111-201ENSMUST00000117659 987 ntBASIC15.09■□□□□ 0.01
U2af1Q9D883 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
U2af1Q9D883 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC15.09■□□□□ 0.01
U2af1Q9D883 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
U2af1Q9D883 Gm29164-201ENSMUST00000185454 1024 ntBASIC15.09■□□□□ 0.01
U2af1Q9D883 Gm43966-201ENSMUST00000203301 612 ntBASIC15.09■□□□□ 0.01
U2af1Q9D883 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC15.09■□□□□ 0.01
U2af1Q9D883 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
U2af1Q9D883 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
U2af1Q9D883 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
U2af1Q9D883 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
U2af1Q9D883 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
U2af1Q9D883 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
U2af1Q9D883 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
U2af1Q9D883 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
U2af1Q9D883 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
U2af1Q9D883 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
U2af1Q9D883 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
U2af1Q9D883 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
U2af1Q9D883 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
U2af1Q9D883 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC15.08■□□□□ 0
U2af1Q9D883 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
U2af1Q9D883 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.08■□□□□ 0
U2af1Q9D883 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC15.08■□□□□ 0
U2af1Q9D883 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC15.08■□□□□ 0
U2af1Q9D883 Gm43102-201ENSMUST00000201004 2324 ntBASIC15.08■□□□□ 0
U2af1Q9D883 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
U2af1Q9D883 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
U2af1Q9D883 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC15.08■□□□□ 0
U2af1Q9D883 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
U2af1Q9D883 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC15.08■□□□□ 0
U2af1Q9D883 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC15.08■□□□□ 0
U2af1Q9D883 Gm42657-201ENSMUST00000201746 211 ntBASIC15.08■□□□□ 0
U2af1Q9D883 Gm2875-201ENSMUST00000211333 360 ntBASIC15.08■□□□□ 0
U2af1Q9D883 Gm5468-202ENSMUST00000227851 682 ntBASIC15.08■□□□□ 0
U2af1Q9D883 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC15.08■□□□□ 0
U2af1Q9D883 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms