Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3a3Q9D554 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3a3Q9D554 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sf3a3Q9D554 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
Sf3a3Q9D554 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sf3a3Q9D554 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.57□□□□□ -0.56
Sf3a3Q9D554 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Gm4986-201ENSMUST00000119731 549 ntBASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Gm14928-201ENSMUST00000120198 477 ntBASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.56□□□□□ -0.56
Sf3a3Q9D554 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Gm6180-201ENSMUST00000065243 498 ntBASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sf3a3Q9D554 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Gm5419-201ENSMUST00000119301 527 ntBASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Gm1335-201ENSMUST00000121653 386 ntBASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Gm18893-201ENSMUST00000198416 943 ntBASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Gm6091-201ENSMUST00000098307 165 ntBASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.55□□□□□ -0.56
Sf3a3Q9D554 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms