Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps33aQ9D2N9 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps33aQ9D2N9 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vps33aQ9D2N9 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vps33aQ9D2N9 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Vps33aQ9D2N9 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vps33aQ9D2N9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Gm12490-201ENSMUST00000120255 560 ntBASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Gm44445-201ENSMUST00000204075 2683 ntBASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Gm7357-201ENSMUST00000195361 2991 ntBASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vps33aQ9D2N9 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Gm7103-201ENSMUST00000195642 1852 ntBASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 AC131029.1-201ENSMUST00000226391 2929 ntBASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Gm23061-201ENSMUST00000102348 116 ntBASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Gm11478-201ENSMUST00000117851 599 ntBASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Gm22331-201ENSMUST00000158066 136 ntBASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 AC122382.1-201ENSMUST00000225869 2371 ntBASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 AC108416.1-201ENSMUST00000228755 1558 ntBASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps33aQ9D2N9 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms