Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Gm7993-201ENSMUST00000200970 1384 ntBASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Gm2383-201ENSMUST00000181461 807 ntBASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Gm4959-201ENSMUST00000197271 1044 ntBASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Gm8913-201ENSMUST00000209491 641 ntBASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Gm7441-201ENSMUST00000220697 1074 ntBASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Lrtm1-203ENSMUST00000224760 3060 ntBASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.8□□□□□ -0.84
Rpusd4Q9CWX4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Gm10764-202ENSMUST00000220397 2335 ntBASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Cir1-201ENSMUST00000058615 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Gm4034-201ENSMUST00000187674 480 ntBASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Mir433-201ENSMUST00000093564 124 ntBASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpusd4Q9CWX4 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpusd4Q9CWX4 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rpusd4Q9CWX4 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpusd4Q9CWX4 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.78□□□□□ -0.84
Rpusd4Q9CWX4 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.78□□□□□ -0.84
Rpusd4Q9CWX4 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpusd4Q9CWX4 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rpusd4Q9CWX4 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Rpusd4Q9CWX4 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpusd4Q9CWX4 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.78□□□□□ -0.84
Rpusd4Q9CWX4 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms