Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Gm15352-201ENSMUST00000118696 270 ntBASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Gm14739-201ENSMUST00000120424 802 ntBASIC11.03□□□□□ -0.64
Otud1Q9CUB6 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Gm17391-201ENSMUST00000171036 126 ntBASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Gm43186-201ENSMUST00000198130 824 ntBASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Gm42732-201ENSMUST00000202887 1197 ntBASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Gm6312-201ENSMUST00000204060 1194 ntBASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Gm5051-201ENSMUST00000204085 485 ntBASIC11.03□□□□□ -0.64
Otud1Q9CUB6 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.03□□□□□ -0.64
Otud1Q9CUB6 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Otud1Q9CUB6 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Otud1Q9CUB6 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Otud1Q9CUB6 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Otud1Q9CUB6 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Otud1Q9CUB6 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Otud1Q9CUB6 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Otud1Q9CUB6 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Otud1Q9CUB6 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.02□□□□□ -0.64
Otud1Q9CUB6 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Otud1Q9CUB6 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Gm24590-201ENSMUST00000116699 119 ntBASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Gm11949-201ENSMUST00000117640 372 ntBASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Gm11700-201ENSMUST00000119409 403 ntBASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Gm4654-201ENSMUST00000183305 982 ntBASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Mir8093-201ENSMUST00000185043 137 ntBASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Gm43916-201ENSMUST00000205062 967 ntBASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Gm10297-201ENSMUST00000207136 651 ntBASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.02□□□□□ -0.65
Otud1Q9CUB6 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Otud1Q9CUB6 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms