Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Paupar-201ENSMUST00000194826 3482 ntBASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Gm23769-201ENSMUST00000104441 121 ntBASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Gm7627-201ENSMUST00000183205 999 ntBASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Gm42751-201ENSMUST00000198065 559 ntBASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Gm30946-201ENSMUST00000198288 724 ntBASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Gm18065-201ENSMUST00000221395 526 ntBASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Snord23-201ENSMUST00000116828 109 ntBASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Gm5395-201ENSMUST00000121650 915 ntBASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Gm3329-201ENSMUST00000159873 556 ntBASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Gm5529-201ENSMUST00000165691 891 ntBASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Gm6612-201ENSMUST00000170777 395 ntBASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Gm9204-201ENSMUST00000212641 947 ntBASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Gm6331-201ENSMUST00000217890 450 ntBASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cldnd1Q9CQX5 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Gm23595-201ENSMUST00000104306 130 ntBASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Gm25148-201ENSMUST00000104611 123 ntBASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Gm12418-201ENSMUST00000118116 942 ntBASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Gm15982-201ENSMUST00000121681 554 ntBASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Gm13827-201ENSMUST00000148801 372 ntBASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cldnd1Q9CQX5 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms