Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Rtn4Q99P72 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Gm13315-201ENSMUST00000120376 991 ntBASIC15.52■□□□□ 0.08
Rtn4Q99P72 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Gm20395-201ENSMUST00000173799 690 ntTSL 3 BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC15.52■□□□□ 0.08
Rtn4Q99P72 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Mir6979-201ENSMUST00000183927 56 ntBASIC15.52■□□□□ 0.08
Rtn4Q99P72 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rtn4Q99P72 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC15.52■□□□□ 0.08
Rtn4Q99P72 AC125209.1-201ENSMUST00000225812 766 ntBASIC15.52■□□□□ 0.08
Rtn4Q99P72 AC123665.1-201ENSMUST00000228204 438 ntBASIC15.52■□□□□ 0.08
Rtn4Q99P72 AC132833.4-201ENSMUST00000228313 203 ntBASIC15.52■□□□□ 0.08
Rtn4Q99P72 Olfr533-201ENSMUST00000071755 1052 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rtn4Q99P72 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.52■□□□□ 0.07
Rtn4Q99P72 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Rtn4Q99P72 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rtn4Q99P72 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.52■□□□□ 0.07
Rtn4Q99P72 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rtn4Q99P72 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rtn4Q99P72 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rtn4Q99P72 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rtn4Q99P72 Gm28240-201ENSMUST00000187560 2053 ntBASIC15.52■□□□□ 0.07
Rtn4Q99P72 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rtn4Q99P72 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Gm12217-201ENSMUST00000118858 696 ntBASIC15.51■□□□□ 0.07
Rtn4Q99P72 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rtn4Q99P72 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC15.51■□□□□ 0.07
Rtn4Q99P72 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Gm8521-201ENSMUST00000190394 606 ntBASIC15.51■□□□□ 0.07
Rtn4Q99P72 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Gm37866-201ENSMUST00000191950 696 ntBASIC15.51■□□□□ 0.07
Rtn4Q99P72 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC15.51■□□□□ 0.07
Rtn4Q99P72 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC15.51■□□□□ 0.07
Rtn4Q99P72 AC107711.6-201ENSMUST00000228455 1088 ntBASIC15.51■□□□□ 0.07
Rtn4Q99P72 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Gm45495-201ENSMUST00000200940 1700 ntBASIC15.51■□□□□ 0.07
Rtn4Q99P72 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 CU062626.3-201ENSMUST00000225522 1411 ntBASIC15.51■□□□□ 0.07
Rtn4Q99P72 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn4Q99P72 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC15.5■□□□□ 0.07
Rtn4Q99P72 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC15.5■□□□□ 0.07
Rtn4Q99P72 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms