Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp1b1Q99LU0 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Gm26286-201ENSMUST00000104166 134 ntBASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Gm15711-201ENSMUST00000118889 535 ntBASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Gm24990-201ENSMUST00000157406 323 ntBASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Gm26448-201ENSMUST00000082446 203 ntBASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp1b1Q99LU0 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Chmp1b1Q99LU0 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.9□□□□□ -0.67
Chmp1b1Q99LU0 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Chmp1b1Q99LU0 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Chmp1b1Q99LU0 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Chmp1b1Q99LU0 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chmp1b1Q99LU0 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chmp1b1Q99LU0 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Gm11439-201ENSMUST00000118598 409 ntBASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Gm15004-201ENSMUST00000119192 630 ntBASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Gm18038-201ENSMUST00000197900 485 ntBASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Gm807-202ENSMUST00000224929 408 ntBASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms