Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm20482-202ENSMUST00000174729 825 ntBASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdk5rap3Q99LM2 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Gm15207-201ENSMUST00000119259 442 ntBASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Gm44364-201ENSMUST00000198368 141 ntBASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Gm43758-201ENSMUST00000199500 367 ntBASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Gm44967-201ENSMUST00000207047 631 ntBASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdk5rap3Q99LM2 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdk5rap3Q99LM2 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.9□□□□□ -0.51
Cdk5rap3Q99LM2 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
Cdk5rap3Q99LM2 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm26047-201ENSMUST00000157308 113 ntBASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm29615-201ENSMUST00000185371 697 ntBASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm28224-201ENSMUST00000186078 697 ntBASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm29001-201ENSMUST00000186177 697 ntBASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm28292-201ENSMUST00000186593 697 ntBASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm28101-201ENSMUST00000187608 697 ntBASIC11.89□□□□□ -0.51
Cdk5rap3Q99LM2 Gm29076-201ENSMUST00000187689 697 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms