Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.13□□□□□ -0.47
Usp11Q99K46 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Usp11Q99K46 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp11Q99K46 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp11Q99K46 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Usp11Q99K46 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.13□□□□□ -0.47
Usp11Q99K46 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Usp11Q99K46 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Usp11Q99K46 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Usp11Q99K46 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.13□□□□□ -0.47
Usp11Q99K46 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.13□□□□□ -0.47
Usp11Q99K46 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
Usp11Q99K46 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp11Q99K46 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp11Q99K46 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Usp11Q99K46 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp11Q99K46 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Usp11Q99K46 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.13□□□□□ -0.47
Usp11Q99K46 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.13□□□□□ -0.47
Usp11Q99K46 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Usp11Q99K46 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Usp11Q99K46 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC12.12□□□□□ -0.47
Usp11Q99K46 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC12.12□□□□□ -0.47
Usp11Q99K46 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.12□□□□□ -0.47
Usp11Q99K46 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Usp11Q99K46 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Usp11Q99K46 Gm12266-201ENSMUST00000120311 962 ntBASIC12.12□□□□□ -0.47
Usp11Q99K46 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Usp11Q99K46 Gm17040-202ENSMUST00000170597 889 ntBASIC12.12□□□□□ -0.47
Usp11Q99K46 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Usp11Q99K46 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Usp11Q99K46 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.12□□□□□ -0.47
Usp11Q99K46 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Gm26448-201ENSMUST00000082446 203 ntBASIC12.12□□□□□ -0.47
Usp11Q99K46 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.12□□□□□ -0.47
Usp11Q99K46 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Usp11Q99K46 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.12□□□□□ -0.47
Usp11Q99K46 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Usp11Q99K46 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Usp11Q99K46 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Usp11Q99K46 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.11□□□□□ -0.47
Usp11Q99K46 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Usp11Q99K46 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.11□□□□□ -0.47
Usp11Q99K46 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.11□□□□□ -0.47
Usp11Q99K46 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.11□□□□□ -0.47
Usp11Q99K46 Gm15004-201ENSMUST00000119192 630 ntBASIC12.11□□□□□ -0.47
Usp11Q99K46 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.11□□□□□ -0.47
Usp11Q99K46 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.11□□□□□ -0.47
Usp11Q99K46 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Gm27552-201ENSMUST00000183351 62 ntBASIC12.11□□□□□ -0.47
Usp11Q99K46 Gm27844-201ENSMUST00000183613 62 ntBASIC12.11□□□□□ -0.47
Usp11Q99K46 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.11□□□□□ -0.47
Usp11Q99K46 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Usp11Q99K46 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Usp11Q99K46 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Usp11Q99K46 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.11□□□□□ -0.47
Usp11Q99K46 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms