Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.59□□□□□ -0.55
Cdk9Q99J95 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.59□□□□□ -0.55
Cdk9Q99J95 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdk9Q99J95 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.59□□□□□ -0.55
Cdk9Q99J95 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cdk9Q99J95 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.58□□□□□ -0.56
Cdk9Q99J95 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Cdk9Q99J95 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.58□□□□□ -0.56
Cdk9Q99J95 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Mir1247-201ENSMUST00000116706 82 ntBASIC11.58□□□□□ -0.56
Cdk9Q99J95 Gm5419-201ENSMUST00000119301 527 ntBASIC11.58□□□□□ -0.56
Cdk9Q99J95 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Gm29396-201ENSMUST00000185659 716 ntBASIC11.58□□□□□ -0.56
Cdk9Q99J95 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cdk9Q99J95 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Olfr284-202ENSMUST00000206647 966 ntBASIC11.58□□□□□ -0.56
Cdk9Q99J95 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.58□□□□□ -0.56
Cdk9Q99J95 Gm18935-201ENSMUST00000212692 664 ntBASIC11.58□□□□□ -0.56
Cdk9Q99J95 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.58□□□□□ -0.56
Cdk9Q99J95 Olfr582-201ENSMUST00000098212 960 ntBASIC11.58□□□□□ -0.56
Cdk9Q99J95 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdk9Q99J95 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Gm13786-201ENSMUST00000122371 333 ntBASIC11.57□□□□□ -0.56
Cdk9Q99J95 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.57□□□□□ -0.56
Cdk9Q99J95 Gm38158-201ENSMUST00000194617 339 ntBASIC11.57□□□□□ -0.56
Cdk9Q99J95 Gm38266-201ENSMUST00000194931 421 ntBASIC11.57□□□□□ -0.56
Cdk9Q99J95 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Gm19994-201ENSMUST00000217086 586 ntBASIC11.57□□□□□ -0.56
Cdk9Q99J95 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdk9Q99J95 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms