Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Gm22920-201ENSMUST00000102175 109 ntBASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Gm5124-202ENSMUST00000132683 2083 ntBASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ddx41Q91VN6 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Gm29499-201ENSMUST00000189151 486 ntBASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Gm28329-201ENSMUST00000191208 689 ntBASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Gm29171-201ENSMUST00000191397 486 ntBASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Gm9463-201ENSMUST00000206707 601 ntBASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Snora73b-201ENSMUST00000083419 205 ntBASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx41Q91VN6 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Gm22711-201ENSMUST00000116890 133 ntBASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.23□□□□□ -0.29
Ddx41Q91VN6 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms