Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Olfr221-204ENSMUST00000216188 2871 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Gm15528-201ENSMUST00000117821 864 ntBASIC12.38□□□□□ -0.43
TraipQ8VIG6 Gm8302-201ENSMUST00000119217 852 ntBASIC12.38□□□□□ -0.43
TraipQ8VIG6 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Gm25492-201ENSMUST00000157383 129 ntBASIC12.38□□□□□ -0.43
TraipQ8VIG6 Gm24398-201ENSMUST00000157870 109 ntBASIC12.38□□□□□ -0.43
TraipQ8VIG6 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.38□□□□□ -0.43
TraipQ8VIG6 Gm18351-201ENSMUST00000188646 883 ntBASIC12.38□□□□□ -0.43
TraipQ8VIG6 Gm38210-201ENSMUST00000191944 809 ntBASIC12.38□□□□□ -0.43
TraipQ8VIG6 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC12.38□□□□□ -0.43
TraipQ8VIG6 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
TraipQ8VIG6 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.38□□□□□ -0.43
TraipQ8VIG6 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.38□□□□□ -0.43
TraipQ8VIG6 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.38□□□□□ -0.43
TraipQ8VIG6 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.38□□□□□ -0.43
TraipQ8VIG6 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.38□□□□□ -0.43
TraipQ8VIG6 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TraipQ8VIG6 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Ighm-202ENSMUST00000177715 1698 ntAPPRIS P5 BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
TraipQ8VIG6 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TraipQ8VIG6 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC12.37□□□□□ -0.43
TraipQ8VIG6 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Gm8531-201ENSMUST00000188319 893 ntBASIC12.37□□□□□ -0.43
TraipQ8VIG6 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Gm37284-201ENSMUST00000193607 539 ntBASIC12.37□□□□□ -0.43
TraipQ8VIG6 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.37□□□□□ -0.43
TraipQ8VIG6 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.37□□□□□ -0.43
TraipQ8VIG6 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.37□□□□□ -0.43
TraipQ8VIG6 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.37□□□□□ -0.43
TraipQ8VIG6 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.37□□□□□ -0.43
TraipQ8VIG6 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.37□□□□□ -0.43
TraipQ8VIG6 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TraipQ8VIG6 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Gm37145-201ENSMUST00000193540 2756 ntBASIC12.36□□□□□ -0.43
TraipQ8VIG6 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
TraipQ8VIG6 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms