Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nup35Q8R4R6 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nup35Q8R4R6 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.36□□□□□ -0.91
Nup35Q8R4R6 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nup35Q8R4R6 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nup35Q8R4R6 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nup35Q8R4R6 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nup35Q8R4R6 Gm3756-201ENSMUST00000169182 1355 ntBASIC9.36□□□□□ -0.91
Nup35Q8R4R6 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nup35Q8R4R6 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Nup35Q8R4R6 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nup35Q8R4R6 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nup35Q8R4R6 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Nup35Q8R4R6 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Nup35Q8R4R6 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.36□□□□□ -0.91
Nup35Q8R4R6 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.35□□□□□ -0.91
Nup35Q8R4R6 CT010447.1-201ENSMUST00000225657 1608 ntBASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Gm45784-201ENSMUST00000188360 142 ntBASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Gm43133-201ENSMUST00000197472 463 ntBASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Gm6266-201ENSMUST00000203844 806 ntBASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Gm19187-201ENSMUST00000206781 892 ntBASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Morn2-202ENSMUST00000227729 656 ntBASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Nup35Q8R4R6 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Gm14071-201ENSMUST00000117817 509 ntBASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Gm17150-201ENSMUST00000165577 381 ntBASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Gm27514-201ENSMUST00000183692 110 ntBASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Rps4l-202ENSMUST00000204242 789 ntBASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Gm7653-201ENSMUST00000214567 508 ntBASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Gm19327-201ENSMUST00000220651 3271 ntBASIC9.34□□□□□ -0.91
Nup35Q8R4R6 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms